Hippoglossus hippoglossus (Atlantic halibut): 117774017
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Entry
117774017 CDS
T07778
Symbol
ncor1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117774017 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117774017 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117774017 (ncor1)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117774017 (ncor1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117774017 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
117774017
NCBI-ProteinID:
XP_034461914
LinkDB
All DBs
Position
14:complement(18671823..18722756)
Genome browser
AA seq
2408 aa
AA seq
DB search
MSSSSGYPTSQGSFSSEQSRYPSHSVQYTFTGTRHQQDFTVPDYRTHMQDAQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSITAQADHDALDSKRPRMDSVAEGHITRNPSTAGGIVL
PMPHTLQDSLRAGVDVKKESQFSVKVESHSQGGHTLHMGEDQDNSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPMEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLEGYGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQNI
CQRYDQLMEAWEKKVDEXGNNPRRKAKDGRTREYYERQFPEIRKQREQQERFYRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLTDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEEKADEKTEEEKSEKSEKKEDEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRQTVTTRSMANEAATVAAEEAPP
SSSEPALPDPPQLPKADPAQRAMKEGAKTPVSAMDANKAGAAETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LATASPDDDEDNADDSEGGDNSSDTESAPSPSQTDSSKSGDSKNAAGDAQCSDQDKGQGS
NGKAPETSYGGLCVKEEKSPESETGSQEEKTRVAPYPGSVHPKTEPQDVDMKTGEVQVKM
EPEMKENREKGDHGEMHRDLHSDNDSSATCSADEDVEAEPERQRIFSMDKPSLLNPPGTV
LVSSPKQVQLNIQQLHQRAASIPAMLPGPFGPGCVPISGFAMLQHQIKAVHESAHQEEKQ
RQDQADLDRRPPFNIRSPTVLDRDGKLLSYLPYDMKLALDQEAHSGLPGSPYRLSPRELS
RASPQPDPNAPSASRYSVPPVLHPAPNQLVQSMPDGVRVTFSRPSRPPNIPSPPPLIPTS
KPTDKPSFIQGGSISQGTPGTYLPPHAVYGPEGTKSTVGSISLGLPRQQDPSKPGGACSS
IQDGRGNQAKMGEGLTYRGSITQGTPALPQSSIAADLLKCTITKLATEDLNIPDKARGEQ
LAKGHVIYEGKSGHILSFDAIKNPRENTRSPRTGHEMKRSYDMMEGSMGRSHTGREGAQF
EGLISRALPREGVHGDSKERPMMTGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFE
GGIGKGKPYEGVNTIKEMGRSIHEIPRQELSGQDLCKTLDMSDRRVMEGSISQIHPHNQT
TIKHNVKSLITSPSKLPHSMPQLEAMERAKYEESKAIRHTSAVNSTTSVLRSTHQEASKS
QLSPGMYEDANARRTPVNYSTNPVSRGSPMLGRAAEGGMSSVKSAAHERKGAMTPTQRDN
VPAKSPVSSGDPVASHSPFDPHHRPVVPGEVYRPHLPPHLDPTLAFHRVLDPAFMFARQQ
SPTNYHNTYQLYTMENTRQTILNDYITSQQMQVIPRPDMTRGLSPREQPVAIPYPAGARG
IIDLAQMPPTILLPHPGGTGAPTLERTAYLPGAQPPFPPRAFNPTSISPGHQAHIAATAA
ANAERERERERDRERDREHQEKEREREQREREREREREMRERERDRERTNEYMRGGGPEQ
PGRPGSRGYLHSPSPLQRTQDVVIQQRPSIFQGKSVITSLMPHSAAATAAAQSNSRYSTA
ADALAALVDAAASAPQMDVSKVKENKHDREDEMASAAAARRAAEQQQQEAERRSMQSPYG
AMSLPGGKPHSAYAEGHSVGAKDKGPQTSKSRIEEELRTRGKTTITAASFIDVIITRQIA
SDKDSRERGSQSSDSSSSLSSNRYDNTGGGAIEVISPATSPVQLQQDKPEEVQQQAAAGM
RAYDMSRYRPSGEPQPSSQQPPSSQADNYSQVHKTHRVMTLADHISHIITQDFARNQDPA
QVSSSASSTFQNVVPSGSSSGRAKVPSRYSPENQVQALHHQRPSSRVSPENAPDKPRSRP
GKSPERGGRLMENYEPISPPQSYQVMDKQEAGGPPPPQRRDAENSEIRSDSRSPGSVSYL
PSFFTKLENTSPMVRSKKQEIFRKLNSSGDSDIGNAQPGTEIFNLPAVTSSSSINPRNHS
FSDPASNLGLEDIIRKALMGNLEERQEEHQGGVGAQCPINNTTGAGSDARQEANRSPSMG
KQKQGKANSRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGS
MQFPYNPLTMRILSNTPPTCISSPSIQSQQQQQQQQPQPPPSGAPVAQQRVWQSLLSEQY
ETLSDSDD
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctaccccaccagccaggggagcttcagcagcgagcagagccga
tatccttcccattctgtccagtacacctttactggcacacgccaccaacaggatttcacc
gtcccagactatcggactcacatgcaggatgcacagggtcggagaagaccatcgttactc
tctgaattccaccctggaactgaaaggcctccggagagacgccatggttacgaacagcag
tttcactccatcacagcccaggctgatcatgatgcattggactctaaacgccctcgcatg
gacagtgttgctgagggccacattacccgaaacccttccactgctgggggtattgtcctg
cccatgcctcacaccctacaggacagcctcagagcaggtgtggatgtcaaaaaggaatct
cagttctctgtcaaagtggagtcccattcccagggaggacatacactacacatgggagaa
gatcaagacaattctccttccaaattatccaaagaggagctgatccagagtatggaccgg
gtggacagggagattgctaaagtggagcagcagattttcaagttgaagaaaaagcagcaa
caactggaggaggaagcagcaaagccaatggagcccgaaaaaccagtgacccctccccca
gtggagcacaagcaccgcagcatagtccaaatcatctacgatgagaacaggaaaaaagct
gaggaagcccataaagttctggaaggttatggtcccaaagttgagctgcccctgtacaat
cagccatcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctgattttgttttttaagcggagaaatcatgctcgtaaacaaagggaacagaatatc
tgccagcggtatgaccagctgatggaggcttgggagaagaaggtggacgaanntggaaac
aaccccagacgcaaagccaaggacggcagaacacgggagtactatgaaagacaattccct
gagatccgtaagcagagagagcagcaggagcgcttctacagggttggacaaagaggaaca
ggcctttctgcaacaattgcgagaagcgagcatgaaatttctgaaatcatagatggcctg
tctgaacaggagaacaatgagaaacagatgagacagctgtcagtcatccctcccatgatg
tacgactccgagcagaggcgggtcaagttcatcaacatgaatggcctgacggatgaccca
atgaaggtgtacaaagcccggcagttcatgaatgtttggacagaacatgaaaaggagata
tttaaggagaagtttgtccaacaccccaagaactttggcctgattgcctcatatctagag
agaaagtgtgttgccgactgtgtcctatattactacttaaccaagaagaaccacaactac
aagacgctggtgaggcgaaattatggaagacggagaggaaggaaccagcaaataacgcgt
ccctcacaagaagagaaggccgacgaaaaaaccgaagaggaaaaatctgagaagtccgag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgtcgtaagggaaggcagaca
gtcaccacacgttccatggccaatgaggctgcaactgtggcggctgaggaagcacctccc
tcttcctctgagcctgccttaccagatcctccacagctcccgaaagctgatccagcacag
agggccatgaaggagggtgctaaaactccagtgtctgccatggatgctaataaagctggt
gccgctgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgctaaaaaa
gggctagttgagcatgggcgaaactggacagccattgccaaaatggtgggcaccaaaagt
gaggcgcagtgcaagaacttctacttcaattacaagagacgccacaacctggacaatctg
ctccagcagcataaacaagatacaaggcgggctcgtgctgataggtctcaaggtgaaggt
ctagccacagcatcacctgatgatgatgaggacaacgcagatgacagtgaaggtggtgac
aacagctccgatacagagagcgccccctccccctctcagactgactcatcaaagtctggt
gactccaagaacgctgcgggagatgctcagtgctctgaccaggacaaaggtcagggcagc
aatggaaaggccccagagacctcatacgggggactctgtgtcaaggaagagaaaagtccg
gagagtgagactggatctcaggaagaaaagaccagggtggctccatatcctggctcagta
catcccaaaactgaaccacaggatgtggacatgaagaccggagaggttcaggtgaagatg
gagcctgagatgaaggagaatagagaaaagggtgatcatggcgagatgcatagggatctc
cattcagataatgactccagtgccacctgcagtgctgacgaggatgtggaagcagagcct
gaaagacagagaatattctccatggataagccttcactgctcaaccctccaggcacggtg
ctggtgtcctcacccaagcaagtccagctcaacatccagcagctgcatcagagggcagct
tccatcccagccatgttgcctggtccttttggacctggttgcgtgcccatcagtggtttt
gccatgttgcaacaccagatcaaagcggtgcacgagtctgcccaccaggaggagaagcag
aggcaggatcaggcagatctggatcgcagaccacccttcaacatacgtagccccacggtg
ctcgacagagatggtaagctcttatcctacttgccttatgacatgaagctggctctggac
caggaggcccactctggtctgccaggctctccctacagactctctcccagggagctgagc
agggcctcaccccagcctgaccccaacgcccccagtgcctcccgctacagtgtgccgcca
gtccttcaccctgctcccaaccagctggtccagagtatgccagatggagttcgtgtgaca
ttcagcagacccagtcgacctcccaacattccctctcctcctccactcattccaacctcc
aagcccacggacaagccgtccttcatccaaggaggctccatctcccagggaactcctggc
acatacctcccaccccatgctgtatatggcccagaggggactaagagcactgtgggctcc
atctctcttggtctgcctcggcagcaggatcccagcaaacctggaggtgcatgttcatcc
atacaggatggcagaggcaaccaagcaaagatgggcgagggtctgacttacagaggatca
attactcagggcacaccggccctgccccagtccagcattgctgctgacctcctgaagtgc
acaatcacaaagctggccacagaggacctgaacatcccagacaaggccagaggagaacag
ttggctaaaggtcacgtcatctacgaaggcaagagtggtcacatcctctcatttgatgct
atcaagaaccccagggaaaacacccgcagccccagaacaggccatgagatgaagcgctct
tacgacatgatggagggatccatgggcaggagccacaccggcagggaaggagctcaattc
gagggtttaattagcagagccttgcccagagaaggagtccatggagattctaaggaaaga
ccaatgatgactggatccatcatgcaaggaacacctagaactgctgcagagacgtatgaa
gatgccatgaaatatggcaaacagatcaagcgagagagcccaccgatccggtccttcgaa
gggggtattggtaaaggcaagccctatgagggggtgaacactatcaaagaaatgggacgt
tctattcacgaaatcccccggcaagaactgtctggccaggacctctgcaagacccttgac
atgtcagacaggagggttatggagggatccatatctcagattcaccctcacaaccagacg
actatcaagcacaacgtcaagtccctcatcaccagtccctccaagcttccccacagcatg
cctcaacttgaggccatggaacgggccaaatacgaggagagcaaggcaatacgccacacc
tctgcggtcaactccaccacctcagtccttcgctccacacaccaagaggcgagcaaatcg
cagctcagcccgggcatgtacgaggatgccaatgctcgcaggacccctgtcaactacagc
acgaatcccgtatccagaggttcacctatgctgggacgtgctgctgaaggtggtatgagc
tctgtgaaatctgctgcacatgaaagaaagggtgccatgaccccaacacagagggacaat
gtcccggcaaagtcccctgtgtcgagtggggaccctgtagcctctcacagccccttcgac
ccccaccaccggcctgttgttcctggggaagtttaccgaccgcacctgcctccgcatctt
gaccccaccctggccttccacagagtgctggatcctgcgttcatgttcgccaggcagcag
tcaccaacaaactaccacaacacctaccagctgtacaccatggagaacacgcggcagacc
atcctcaacgattatatcacttcccagcagatgcaagtcattcctcggcctgacatgacc
cggggattgtcaccaagggaacaacctgttgctatcccttacccagctggagcacgaggg
attattgatctagcccagatgcctccaactatcctgttgcctcaccctgggggaacaggt
gctcccactttggaacgcaccgcctacctccccggagctcagccccctttccctcctagg
gctttcaacccaacctccatatcgccaggtcaccaagcccatattgctgcaactgctgcc
gccaatgcagagagggaaagggagagggagcgtgaccgtgagcgtgaccgcgagcatcag
gagaaggagagggagagggagcagcgtgaaagggagagggaacgggagagggaaatgaga
gaacgagagcgcgaccgggagcgaaccaatgaatacatgcgtggaggtggaccagagcaa
ccgggccggccaggaagtcgaggttatctgcactccccttctcccttgcaaagaacacag
gacgtagtgattcaacaacggccgagcattttccagggcaagagtgtcatcacctcttta
atgcctcattcagcagcagcaacagcagcagcacaaagtaactctcgctacagtactgcc
gctgatgctctggctgcattggtggacgctgcagcctctgctccacagatggatgtgtcc
aaggtgaaggagaacaaacacgatcgggaggatgaaatggcatcagcggctgccgctcgg
cgagcagccgagcagcagcaacaggaggcagaaagacgatccatgcagtccccttatggt
gctatgtctctgccgggaggtaagccccattcagcttatgctgagggccatagtgttgga
gctaaggataaaggacctcaaacatcaaagtcccgcatcgaagaggagcttcgtacccga
ggaaagacgactatcacagccgctagcttcattgatgtcatcatcacacggcagatagcg
tctgacaaagactcacgagagcgaggatctcagagctctgactcctctagcagcttgtca
tctaatcgatatgacaataccggtggaggagccattgaggtgatcagtcctgctacttcc
ccagtccagctccaacaagacaaaccagaagaagtgcaacagcaggcagcagctggcatg
cgggcctacgatatgagtcgttaccgaccatcaggggagccgcaacccagttcccagcag
cccccctcctcccaggcagataactactctcaggtccataagactcaccgagtcatgacc
ttggcagatcacatttcgcatatcataacccaggactttgcccggaatcaggaccctgcc
caggtttcttcctcagcttcttcaacattccagaacgtggtgccatctgggtcctcttca
ggtcgtgccaaggtgcccagccgctacagtcctgagaaccaggttcaggccctacaccac
caaagaccctccagtagagtttcaccagagaatgctcctgacaagcccagatccaggccg
ggtaagtctccagagcgaggaggcaggctgatggagaactatgaacccatttctccacca
cagagctaccaagtcatggacaagcaggaggctggcgggccgcctccacctcagaggcga
gatgctgagaactctgagatcaggagtgactcgaggtccccgggcagcgtaagctatctg
ccttccttctttaccaagctggagaacacctcgccaatggtgagatccaagaagcaggag
atctttcgtaagttgaactcctctggtgattctgatattggaaatgcgcaacccggcaca
gagatttttaacttgcctgctgttaccagctccagcagcatcaacccgaggaatcactct
ttcagtgatccagccagtaacctgggcctggaggacataatccgcaaagcgttgatgggt
aacttagaggaaagacaggaggagcaccagggaggtgtaggggctcagtgtcctatcaac
aacacaaccggtgcaggcagtgacgcccgccaggaggcaaaccgatcacccagcatgggg
aagcagaagcagggcaaagccaacagccggaaatccaagtcacctaatttgggtcaggcc
tacgctggaggggaacgtccctcttcagtgtcctccgtccattctgagggagattatcac
agacaagcccaagcccaaccccagtggagttgggatgaccgaccctcgtccacaggatca
atgcagttcccttacaacccactgaccatgcgcatcctaagcaacacgccaccaacctgc
atatcctcaccctccatacagagccagcagcagcagcagcagcagcagccacagccgcct
ccgagcggagcccctgtggcccagcagcgcgtttggcagtctctcctgtcagagcaatat
gagaccctgtctgacagtgacgactga
DBGET
integrated database retrieval system
