Hippoglossus hippoglossus (Atlantic halibut): 117774023
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Entry
117774023 CDS
T07778
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin B/C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03320
PPAR signaling pathway
hhip04120
Ubiquitin mediated proteolysis
hhip04137
Mitophagy - animal
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117774023 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117774023 (ubb)
04137 Mitophagy - animal
117774023 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117774023 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117774023 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117774023 (ubb)
Ubiquitin system [BR:
hhip04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117774023 (ubb)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of breast milk
117774023 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
117774023 (ubb)
Exosomal proteins of colorectal cancer cells
117774023 (ubb)
Exosomal proteins of bladder cancer cells
117774023 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
117774023
NCBI-ProteinID:
XP_034461928
LinkDB
All DBs
Position
14:18738885..18749192
Genome browser
AA seq
989 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcactggcaagaccatcaccctcgaggttgagcctagt
gacacaattgaaaatgtcaaagctaagatccaggacaaggaaggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtcctgcggctgaggggaggtatgcagatcttc
gtcaagaccctcacaggcaagaccatcaccctggaggttgagcccagcgacaccattgaa
aatgttaaagccaagatccaggacaaggaaggcattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcggctgaggggaggtatgcagatcttcgtcaagaccctc
acaggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgttaaggcc
aagatccaggacaaggaaggtattcccccagaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagacc
atcaccctggaggttgagcccagcgacaccattgaaaatgttaaggccaagatccaggac
aaggaaggtattcccccagaccagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagcccagcgacaccattgaaaatgttaaggccaagatccaggacaaggaaggtatt
cccccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctcactggcaagaccatcaccttggaggttgagcccagc
gacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggttgagcccagcgacaccattgaa
aatgttaaggccaagatccaggacaaggaaggtattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccttggaggttgagcccagcgacaccattgaaaatgtcaaggcc
aagatccaggacaaggaaggtattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactataacatccagaaggagtccaccctccat
cttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagacc
atcactcttgaggttgagcccagcgacaccattgaaaatgttaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcaccttggag
gttgagcccagcgacaccattgaaaatgtcaaggccaagatccaggacaaggaaggtatt
cccccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactataacatccagaaggagtccaccctccatcttgtcctgcgtctgaggggaggt
atgcagatcttcgtcaagaccctcacgggcaagaccatcaccctggaggttgagcccagc
gacaccattgaaaatgtcaaggccaagatccaggacaaggaaggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactataac
atccagaaggagtccaccctccatcttgtcctgcgtctgaggggaggtatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggttgagcccagcgacaccattgaa
aatgtcaaggccaagatccaggacaaggaaggcattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggtatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgttaaggcc
aagatccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcttgcgtctgaggggtggtcaataa
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