Hippoglossus hippoglossus (Atlantic halibut): 117774029
Help
Entry
117774029 CDS
T07778
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117774029 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117774029 (trpv1)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117774029 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
117774029
NCBI-ProteinID:
XP_034461951
LinkDB
All DBs
Position
14:18771107..18806999
Genome browser
AA seq
786 aa
AA seq
DB search
MKKSEMFGFSLEADDRTEEKKSRQTAAKGDGLVSALGLGQKAQKAPMDTDYQEEMEETKS
KLRFNLNFDKAIQGIEQDDRTRESQTFDIERLFEAVASGDVRKLEGLGLYLYQNMKRLSD
SLYQSYGKTTLMKALLHLRDGKNETVELLIEISERLGDIKEFVNAAYTSSYYKGQTALHI
AIERRSISYVKLLVSKGADVHAKACGKFFQPHDSPYFYFGELPLSLAACTNQADVVDFLM
ENEYEQADAKLADSQGNTVLHALVVIADNSIENTDFITNIYDGILKTTARLHPKLKLEDI
ENHQGLTPLKMAAKTGKIGLFAHILKREFQESQTKHLSRKFTEWVYGPVTCSLYDLASLD
SCEEASVMEILIRGSDIPNRHKMLETEPLTRILDEKWKKFAGPLFFLNFLFYIVYLIIFT
IVGYNKKEGKTPFPLEHNLIGYLYVSGQLLLLLANIYFFLGGIIDMCRKRPKLQTLMIDG
YYEILFFVQGFLFMTSAGLYVCGRQEYLGFMVLCLALSWVNLLYYSRGDRHMGIYSVMIQ
KMILSDLLKFLFVYVVFLFGFSAAVVSLLKEPPVKNKTVKIGQGRLFGPIAADEECVKPS
FTNIAYTTLQLFKFTIGMGDMEFTQDYHNREVFYILLIAYIILTYILLFNMLIALMNRTV
ERIKMQSSSIWKLQRSITILDMEKRLPGFMRRRLRCGVEKKLGTVLGDDCRRCFRVEEVN
WNKWNINLGKINEDPGCWDRLRQPTPDTPPHRPNRGRSWRGLFGDGSRRLQTHQSTEMFP
LSDLPV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcggagatgtttggcttctccctggaagcagacgacaggacggaggagaag
aaatcgcggcaaacagcagcaaagggggatggattggtctctgctttgggtttgggccag
aaggcccaaaaggcaccaatggacactgattaccaggaagaaatggaggagacaaagtcg
aaactcagattcaatctcaactttgacaaagcgattcaaggtatagagcaggacgacagg
acgagagagagtcagacatttgacattgaaaggctgtttgaagcagtggccagcggagac
gtcagaaagctggagggcctgggcctgtacctgtaccaaaacatgaagagactgtccgac
tccctctatcagtcgtatggcaaaaccaccctcatgaaggctctcctgcacctcagagat
ggcaagaacgagactgtggaattattaattgagatttccgagaggctgggcgacattaaa
gagtttgtgaatgcagcctacaccagcagctattacaaaggtcagacagctctccatata
gccatcgagaggaggagtatttcctatgtgaaactactggtcagtaaaggagcagatgtc
cacgccaaagcctgtggaaaattcttccagccacatgacagcccctacttttactttggt
gagctgcctctgtctctggccgcatgcaccaaccaggctgacgtggtggacttcctgatg
gagaacgagtacgagcaggcggacgcaaagctggcagattctcagggtaacacagtactg
catgctctggtggtgattgctgacaactccattgagaacacagacttcatcaccaacata
tacgacggcatcctcaagaccactgcccgactgcatccgaagctgaagctggaagacatc
gagaaccaccaggggctaacacctctcaaaatggctgccaagactggcaagatagggctt
tttgcccacatcctgaaacgggaattccaagagagccagaccaaacatttgtcccgtaaa
ttcactgaatgggtttacggaccggtcacctgctccctgtacgacctggcctcgttggat
tcgtgcgaggaagcctcagtcatggagatactaatccgcggcagcgacattcctaaccgt
cacaagatgcttgagacggaacctctgacccgaatactggatgagaagtggaagaagttt
gcgggtcccctgtttttcctcaacttcctgttctacattgtgtacctgatcatattcact
attgtgggttacaataagaaagaaggaaagactccctttcccctcgaacacaacttgatc
ggttacctgtacgtttcaggccagctactgttactactggcaaacatctatttcttttta
ggagggataattgacatgtgcaggaagcgaccaaagctgcagacgttgatgatcgatgga
tattatgagattctttttttcgtgcagggcttcctcttcatgacctcggccgggctgtac
gtgtgcgggcggcaggagtacctgggcttcatggtgctgtgtctcgccctgagctgggtg
aacctgctctactattccaggggagacagacacatgggcatctacagtgtcatgatacag
aagatgatcctcagtgacctcctgaaatttctttttgtctatgtcgtcttcctctttgga
ttttcagcagccgtggtctccctgctcaaagagcctcctgtaaaaaacaaaacggtcaaa
ataggtcaggggcgtctctttggccccatcgccgctgatgaggagtgcgtgaaacccagc
ttcaccaacatcgcctacaccacgctgcagctcttcaagttcaccatcggcatgggcgac
atggagttcacgcaggactaccacaatagggaggtcttctacattctcctcatcgcctac
atcatactcacctacatcctgctgttcaacatgctcatcgccctcatgaaccgcaccgta
gagaggatcaaaatgcagagcagcagcatctggaagctgcagaggtccatcaccatcctg
gacatggagaaaaggctgcctggtttcatgaggaggaggttgcgctgcggggtggagaaa
aaactgggcacggttcttggagatgattgtcgccggtgtttcagagtggaggaagtcaac
tggaacaaatggaacatcaacctgggcaaaatcaatgaggatcccggctgctgggatcgt
ttacgccagcccacaccagacactccgccgcacagaccaaacagagggaggagctggaga
ggcttattcggggacggcagtaggcgattgcagacacatcagtccacagagatgtttcct
ctgagcgacctaccggtctga
DBGET
integrated database retrieval system
