Hippoglossus hippoglossus (Atlantic halibut): 117774089
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Entry
117774089 CDS
T07778
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117774089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117774089
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117774089
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117774089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117774089
NCBI-ProteinID:
XP_034462065
LinkDB
All DBs
Position
14:complement(19028249..19115920)
Genome browser
AA seq
945 aa
AA seq
DB search
MHQEPTHSHDPHTGTSVPPRHLTRAHGDDAPLPTGLVFPSHAEVSSSSDATHLHEDFMAC
ANHGNPNFSTFYAQAAQYLPDSVPTFLECYQLNHVDNGLLTWLPRTHGFFQAANEVIQAP
PSRVVSSEKPVPVSELSSSTSFTILSNSFASTRTANPQTIIIDRSSNADGSTYSEHKESV
TSVTELMPEDAMYEYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDALPRPVVLVEAEHAEELMGLVNKNEEAKVRIEIKVEQS
RWPHYDMGILLTIILAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAINRLETKTYNSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLVQHRTCP
LCMHNIMGEDKHIYRTERQPQRSRLQQSPEQSQGFLQPQHYSSPHNHPFPQHAIPFSMRP
HYPRGPSGPYPSLGHYSGSSPMDTQTLRFLTSRPLGPGCGYRLPAEGPGRPHRIGGNCRT
STHHYTPRRSCHNYRLSCPTQRSASCSRLHHTASGTPQTRGAPAHSRQDEGSCSGGSYHT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYFG
PGPGRGPRRNSLEAGAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHS
QGPSRGSDEEQGAAAAAAPAALVLDKDSPVGPAKHSPCQCPKPDPTDRPSPGQGERHDHD
PSSPSGPPVLMSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLPDDRS
IHIHYGQGPGFCCSPPELHPALLPVPLILDSGGMEEWPCCAGAHVVWQKRVQQARSEPQL
LGPGTSMDRPPCRLHHGPAADCNTDICLYCQTLHHNQGSEEESGV
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggagccaactcattcccacgatccacacactggaacctcagtcccaccacga
cacctgaccagggcccacggtgatgatgcacctttaccgactggactagtatttccaagc
cacgcagaagtatcctcaagctccgatgccacgcacctgcacgaggatttcatggcctgt
gcgaaccatgggaatccaaacttcagcactttttatgctcaagctgcacagtatctgcct
gactctgttcccacattcttggagtgctaccagctgaaccatgtggataatgggcttctg
acatggctacccaggacccatggttttttccaggctgcgaatgaagtgattcaagctcca
ccgagtagagttgtgagctcagagaagccggtccctgtgtcagagctgtcctccagcacc
agttttaccattctgagcaacagctttgccagcaccaggacagccaaccctcaaaccatc
ataatagataggtcgagcaatgctgatggatctacgtacagtgagcacaaggagtctgtg
acttcagtgactgaactcatgccggaagatgccatgtatgagtatcaccctttgtcattg
tgcaacacaagcgaggatgaacggcaagagagtgacttcatcaccattgtcaagctggag
cacagggtaccccgctgcctgccgctgctcgataaggctcgcatggcgctggacaaagga
gctcaggctgttatctttgacgtcagtgatgatgccaatgctgctgctgagctgcgagaa
acagacgcccttccgcgaccagtcgtgctggtggaggccgagcatgcagaggagctgatg
ggtttggtcaacaagaatgaggaggccaaagttcgcattgagatcaaggtggaacagtct
cgatggccccattatgacatgggtatcctgctcaccatcatcttggctattctcaccatc
gtcttaatctttgccttccgttacaagtgcaagtccaacaggacctgggactctgtccac
cagcagaccatgcgggccatcaatcgcctggagaccaaaacctacaactctcagggctgc
tcgggctcgcagcggcaccgggcggcctggggctcagccagcagctccaactcgagcccc
gtctgtgctatctgtctggaggagttccaggacgggcagcacctgaggatcatctcctgc
gctcatgagttccataaagactgtgtcgacccctggctggtgcagcaccgcacctgtccc
ctctgcatgcacaacatcatgggtgaggacaagcatatttacaggacagagcggcagccc
cagaggagcagactccagcagagtccagagcaaagtcaaggcttcctccaacctcagcat
tacagcagcccacacaaccaccctttccctcaacatgctatccccttctctatgaggccc
cactatcctcgtggaccctctggaccatatccctctctgggccactatagtggctcttct
cccatggacacgcaaactctgcgtttcctcaccagcaggccgcttggccctggctgtggg
taccgccttcctgcagagggtcccgggaggccccacaggattggaggtaactgcaggacg
tccactcaccactacacgcctcgtcgctcctgccacaactatcgtttgtcctgtccgacc
cagcgcagtgcatcctgctcaagactgcatcacactgcctctggcacgccacagacccgt
ggagcgcctgcccacagtcggcaggatgagggcagctgctcaggtggcagctaccacaca
gaacgcagtggatatttggctgacgggccagcaagtgactccagctcagggccctgccat
ggctcctccagcgactcagttcttaactgtactgacgtgtccctgcagggagtttatggc
agctggtccaccttccgtagctctctgagtagtgactacgatccatttgtatattttggg
ccaggtcctgggcggggccctcggagaaacagcctagaggctggtgcgcaagcccggccc
aggtctctggattctgtggtgaacaaagcgggctgccctgaagaacagccacagactgtg
ttcagccacatccactaccaccgccacagacaccaccactatgaggagggggagcacagc
cagggcccgagcagaggctcggacgaggagcagggggccgctgctgctgcagcacctgct
gctcttgtcctggacaaagactcacctgtgggccctgctaagcacagtccctgccagtgc
ccaaagccagaccccacagatcggcccagcccaggacagggagagcgtcatgaccatgac
cccagcagtccctcaggacctcctgtcctgatgtccccgatccccttacagctccaaccc
cactgctgccaccagggacatggacacccccccgctcctcttgggcgagttggtggctgt
gttcttgatggcccctctgttcgcttccaccagagcctggatctgccggatgaccgtagc
atccacattcactacggccagggcccaggcttctgctgctctccccccgagctgcacccg
gctttgctccccgtgcccctcattctggactccggagggatggaggagtggccttgctgt
gccggggcccatgtcgtgtggcaaaaacgggtgcagcaggctcgctcagagcctcagcta
ctggggcctgggacttctatggacaggccaccctgcaggctccaccacgggcctgctgct
gactgcaacacagacatttgtttatactgccaaacattacaccacaatcagggatcagaa
gaggagtctggtgtttga
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