Hippoglossus hippoglossus (Atlantic halibut): 117774101
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Entry
117774101 CDS
T07778
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117774101 (rnft1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117774101 (rnft1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117774101 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-RING_6
RING_XB3-XBAT31
Prok-RING_4
DUF7190
Zn_ribbon_6
Bac_export_2
Motif
Other DBs
NCBI-GeneID:
117774101
NCBI-ProteinID:
XP_034462100
LinkDB
All DBs
Position
14:complement(19893582..19898717)
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AA seq
426 aa
AA seq
DB search
MKLRLQNDRSDSRRALKVRESPTVMQPNSSEQDAHAGNGLSLTLQQDLLTRTPGSGSAAA
NPESHEVRVPMASETGESGGGTSSSRRSRVSFHSHPHSHSHGHNRAQHHSNSEPELDPPD
PDLDSGEPSSSLSELRYLFRWLQKSLPFLIILCAKLVIQHTLGLAVGVGLFTTFLYVNKS
IQTQVFLQDHHSKLQSIWLLLFLIFSTLLLYYTFLTETLYYCLIFLSPSIEPLGFWEVLW
AVGITNFIIKFLVMGIKCLILLLPSSLVTNRAQGRWMMLTEELGQVHQAMAPVSLWFRYL
VTYQEAEGAVGLTLGVLLALLYLILKLLGLYGQWTSLLKTVRICLKGEHTGTAATRSQCS
EAGDVCPICQGEYREPRALLCQHIFCDECIALWFNREKSCPLCRTVITEKVYKWRDGATS
PHLQIY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccggctgcagaatgacaggagtgattccagacgagcactgaaagtaagggag
tctcctactgtaatgcagcccaattcaagcgagcaggacgctcatgcaggaaatggtttg
tccctgacgctgcaacaagatcttctcaccaggacgccgggctctggttcagctgctgcc
aaccctgagagccacgaggtgcgggtgcccatggcaagcgagactggggagtccggtgga
gggacatcatcatccaggaggtccagagtcagtttccacagccacccccattcacactca
cacggacataatcgggcgcagcatcactccaattctgagcccgagcttgacccgcctgac
cctgatctggactcgggagaacccagctcctccctgtctgagcttcgctatctcttccgc
tggctccaaaagagtcttcctttcctcattatactgtgtgctaagctggtcatccaacat
actcttggtctagcagttggggttggcctcttcacaacttttttatatgtgaataaaagt
atacaaacgcaagtttttcttcaggatcatcactcaaagctacagagcatctggctgcta
ctcttcctgatcttttcaacgcttctgctctactacacttttctcactgagacactttac
tattgcctcatcttcctcagcccatccattgagccgctgggtttctgggaagttctctgg
gcagtcggcatcaccaatttcatcattaagttcctcgtcatggggattaagtgccttatt
ctgctgctgccatcttcactagtgaccaacagagcccaggggaggtggatgatgctgact
gaggagctgggtcaggtgcaccaggccatggctccagtttcactgtggttccgctacctg
gtcacctaccaggaggctgagggggccgttggactcacacttggggtcctgctggctttg
ctctacctcatactgaagcttttaggattgtatggccagtggacatctttacttaaaacc
gtgaggatatgtctgaagggagagcatacaggcacagcagccactaggagtcagtgcagc
gaggcgggagatgtctgccccatctgtcagggagagtacagggagccccgggctctactc
tgtcagcacattttctgtgacgaatgcatcgctctgtggttcaaccgggagaagagctgc
ccgctctgccgcacggtgatcacagagaaggtctacaagtggagggacggagccacatcg
ccacacctgcagatttactga
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