Hippoglossus hippoglossus (Atlantic halibut): 117774151
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Entry
117774151 CDS
T07778
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117774151 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
117774151 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117774151 (thoc2)
03041 Spliceosome [BR:
hhip03041
]
117774151 (thoc2)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117774151 (thoc2)
Spliceosome [BR:
hhip03041
]
Complex C
Other components
EJC/TREX
117774151 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117774151 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
117774151
NCBI-ProteinID:
XP_034462200
LinkDB
All DBs
Position
14:complement(15384003..15405522)
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWFKNWEKTGKHEFVQLCKELTEKTDHGSEVRDIQAALYELCWQVVQGNLKL
DLVTSVLGDMMELRDDMPSILADVFSILDLETGALEEKIKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQALQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPTSLYHIAAALLHHNLIELEDLYVHLMPQDATIIEEHKRDISE
AKQVARKLVMVVLPSEKNEDKEKEKEKDEEKNEKPPDNQKLGLLEALLRIGDWQHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGVPKGSKGRIAHPLRNKRAPRPAEIFE
DLRRDTFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQSDSKIEVKDKMDTLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYRHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLLQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDEMKKGEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPSRVWDDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KVQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLFA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKDCVNFPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVQKICLEEKDKRPDLYALAMGYSGRLKGQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPTTSTNKTDEGASEDGERGKDKSSATTKPVNKANSAAAKVTTSNGNGALISTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERPAREGKEKTPKADRE
KVKVEEKSSKDDKAKAGNGEPIEPSRERDAIKESKSKEKGDRSAVAGSLKSPGLRSESAE
SERDHKRRKLDTHSSPSHSSSVKDNSNEPKESTSKHHISYNSVTRSKSRERETEKKDSEN
AQGRSKEKKEEKDRKERKRDHIVNDHETNLETKRRKDENGTNSSKNRKSTSPLCDSPLSA
EKEKSKRSKSSSKEKAESGKPERTSSGGKKESRHDKEKSEKKEKRDSSGAKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggttcaaaaactgggaaaaaactgggaaacac
gagtttgtacaactctgcaaagaacttacagagaaaacagatcatggaagtgaggttaga
gacatacaggccgccttatatgagctctgctggcaagttgtacaagggaaccttaagttg
gatctcgtcaccagcgtccttggggacatgatggaactccgcgatgacatgccatccatt
ttagcagatgtgttcagtatactagatttagaaacaggtgctctggaagaaaaaatcaaa
cgtgatcattacacacaattggtgggagcatgtttgttctttgttccagaggctatcttg
aaagagagactggatccagaaacccttgaatctcttggacttataaaacaagcccttcag
ttcaatcagaagattgtaaaaatcaaaactaaactattttacaagcaacagaagttcaac
ctgctaagggaggagaatgagggctatgccaaactcatcactgagcttggccaagacctt
tcaggcaacatcaccagccatcttgttctggagagcatcaagtccctcataggatgtttc
aacttagatccgaatcgtgtattggacatcatccttgaggtgtacgagagtcgatctgac
caagatgagttcttcttgtctctcatcaagtcctacatgtgtgagccactcaccctttgc
cacatcctgggatttaagttcaaattctaccaggagcccaatgaggaaacccccacgtca
ctttaccacattgctgctgctctgcttcaccacaacctgatagagctggaagatctttat
gtacatcttatgccacaagatgccaccatcatagaggaacacaaacgggatatctcagag
gccaagcaggttgctcgcaagctggtcatggttgtgttgccttcagagaagaatgaagac
aaagaaaaggagaaagagaaagatgaggagaagaatgagaagccacctgataaccagaag
cttggtctattggaagcgctgcttagaattggagactggcaacacgcccagagtattatg
gaccagatgccttccttctatgctacgtctcacaaggccattgcactggctctctgccag
cttgtacacctgactgtggaacctctttacagaagggctggtgtcccaaaaggttcaaag
ggacgtatagcgcatccactgaggaacaagcgcgcacctcggcctgcagagatttttgag
gacctacgcagggacacgttcagcatgctctgctacctgggccctcacctctcccacgac
cccatcctcttcgccaagatagtgcgtctgggcaagggcttcatgaaagagtaccaaagt
gacagcaagattgaagtcaaagacaaaatggacacactactcagttgtttcctgagcatt
gcagaccaggtgctactcccttcgctctccctaatggagtgtaatgcttgcatgtctgag
gaactgtggggcctcttcaaactgtttccctaccggcacaggtatcggttatatggacaa
tggaagaatgagacgtattccagtcatcctctcttggttaaagtcaaagcgcagactgtt
gaaagggccaaatacattatgaagcggttgaccaaagagaatgtgaaacagtctggaagg
cagattggcaagctgagccatagcaatcccactatcctctttgattatatgctgtctcag
atccagtggtacgacaaccttattgttccagtggtggactcactgaaatacctcacatcc
ctcaactatgatgtcttggcttattgcataatcgaggctcttgccaatcctgagaaggag
aagatgaagcatgacgacactaccatctcctcatggcttcagagtctggcaagtctttgt
ggagctgtgttcagaaaatacccaattgagttggctggcctccttcagtatgtcaccaat
cagctgaaagcaggaaagagttttgacctgctcatcctgaaagaggtggtccagaaaatg
gccggcattgagatcacagatgagatgacctcagaacagttagaggccatgaccggaggg
gagcaactcaaagcagagggcggctactttggccagatcaggaacacaaagaagtcatct
cagcgtctgaaggatgcactactggaccatgaactggccctaccactgtgtctgctaatg
gcccagcaacggaatggtgtggttttcttagaaggtggagaaaaacaccttaaacttgtt
ggccatctctatgaccagtgtcatgacacattgctgcagtttggtggctttctggcctcc
aacctcagcacagaggattacatcaagcgggttccctcgattgacatcctctgtaaccag
ttccacactccgcatgatgctgccttcttcttgtctcggccaatgtacgcccatcagatt
ttgtcaaagtatgacgagatgaagaaaggggagaaaggcaaccggcagcagcagaaggta
cacaaatacgtggcagcctgtgaacaggtgatgacaccggtgcacgaggctgtggtgtcg
cttcatccttccagggtgtgggatgacctccgccctcagttttatgccaccttctggtcc
ctcaccatgtatgatctggctgtgcctcacgccgcatatgaacgtgaggtcaacaagctc
aaggtccagattaaagccattgaagagaatccagagattcccttgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggagaaactgcaggaggaggagaagaagcagctg
gaacacgtccaaagggttttacaccgtctcaaactggagaaagacaactggttgtttgcc
aaatccacaaagaatgagaccatcacaaagttcctgcagctctgtctgttcccgcgctgc
atcttctcttccatcgacgctgtgtactgcgcccgctttgtcgagctcgtccaccagcag
aaaacgcccaacttctgcacccttctctgctatgacagggttttctctgccattatttac
actgtggccagctgcacggagaacgagtctcaccgctacggccgcttcctctgctgcatg
ctggagacggtgacccgttggcacagcgatcgtgcaatctatgagaaggattgtgtgaat
ttccctggcttcctgaccatcttcagagccaccggctttgatggagggaacaaagcagat
cagctagattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa
gcttcagttcactgcctggagacgggagattacacccacatccgcaacattctcatcgtg
ctcaccaagatcctgccctgctatcccaaagtcctgaacctgggccaagcgctcgagtgc
cgtgtccagaagatctgccttgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaggccagaaggtgcacatggtccctgagaatgagttt
catcacaaggagcagccagcgcgcagtgccacccctgccagtcagcagaacggccccggc
agcacaggcaagcccaccaccagcacaaacaagacagacgagggggcatcagaggatggt
gaacggggaaaggataaatccagtgcgacaacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaatgggaacggtgccctcattagcaccaaagccgtaaaa
gagcgggatgacaaagagaagagcgggaaagagaaaaaagagaaaaaggaaaagacaccg
ggcagcactcctgagacaaaggccgagaaccgtcgggagaagcagagagacgagagagcg
ggaaaggaggagcggccggcacgtgagggtaaggagaagacccccaaggctgacagggag
aaagtgaaggtcgaggagaagagcagcaaagatgacaaggccaaagccggcaacggggag
cccattgagccgtccagggagcgcgacgccatcaaggagtccaagagcaaggagaaagga
gacagaagcgctgtggcggggtccctcaagtcaccaggtctcagatcagaatcggccgag
tctgagagggatcacaaaagacgaaagctcgacactcactcttctccatcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcatcacatcagctac
aattcagtaacccggtccaagagcagagagagggagacggagaagaaagactcagagaac
gcacagggccgatccaaagagaagaaggaagaaaaggatcggaaagaaaggaaacgagac
catattgtcaatgaccacgaaacgaacctagaaaccaaacgtagaaaggacgagaatgga
accaattcctccaaaaacagaaagagcacaagtcccttgtgtgactcgccgctttctgct
gaaaaagagaagagcaaaagatccaaatcttccagcaaggagaaggcggagtctgggaaa
cctgagcgaacgtcctccggaggcaaaaaggagtccagacacgacaaagagaaatctgag
aagaaagagaagagggacagcagtggagcaaaggaagagaaaaagcatcataaatcctct
gacaagcacagataa
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integrated database retrieval system
