Hippoglossus hippoglossus (Atlantic halibut): 117774195
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Entry
117774195 CDS
T07778
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117774195 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117774195 (zgc:163098)
Spliceosome [BR:
hhip03041
]
Complex A
U2 snRNP components
U2 related factors
117774195 (zgc:163098)
Complex B
117774195 (zgc:163098)
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Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
117774195
NCBI-ProteinID:
XP_034462313
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Position
14:14132847..14146053
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AA seq
882 aa
AA seq
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MADKKGKTVIKTRKEQEKIKKKEEEKAAEVFEEFLASFETNQKSGVKTFVRGGIVNATKE
EEAAEVKKNKLYRPPTKFVPGSQNVSPVSSTESRKATFKRRTDEKKKSNLELFKEELKLI
QEEREERHKRKKNDPGTGGGSVGGGGGAYGDLDIPLSGRSTLYDDLTVPTTTNLYISCIS
PKMNEELLCKEFGKYGPLASVKIMWPRTDEERNRTSNRAFVAFMTRKDAERALASLDGKM
IMGFEMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRGRFRNDFTKPLGVSKG
ELDKTLSEAVVKVVIPTERNLLLLIHRMIEFVVREGPVFEAIIMNKEKNNAEYKFLFDNK
SQDHVYYRWKLFSILQGESPTEWRTTDFRLFRGGSLWRPPVLNNYSQEEEGTEAEEEASP
EEEVKKGQLRNEHRLRLEMLLKDLTPSREDIASTMLFSLERADAAEEVVGLIAESFALLQ
TPLQKKIARLYLVSDILHNSCAKVAGASYYRKYFETNLTQIFADLNAAHKNIQARLQAEQ
FKQKVMSCFRAWEDWAIYPEPYLIHLQNIFLGFAKAVEELPEPAEKSSFELDGAPMDSAP
IDGLPLDRAPVDDLDGCPMGWDPLDGVPADDLDGVPLGVVVDDIDGMPLDDGNAPLSIVP
LSKWEKTSDTGTFSEAKAKSKWDTVAEQDGEDEVNVSVKSQDGEEDSESDSTDEDSGSSA
KYESADFQSSLRSFQMSESKRKRLRELEVKVMKFQDELESGKRQRKSGMSIQQQVEHYRN
KLLQKEFEKDEEKTERSSSKSKDRSKEDRKDKDRSKRSEDGDRKQGRSRDPDDKTQKSRS
ISPPRNRSPKRSKRSPSPDRKAGKSRSRSPHRSHKKTKKSKH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaagggaaaaactgtgatcaaaacaaggaaagaacaagaaaagattaag
aaaaaggaggaagaaaaagcagcagaggtttttgaggaattcttggcctcgtttgagacc
aaccagaaaagcggagtaaagacttttgtccgcggtggtatcgtgaatgcaactaaagag
gaggaagcagcagaggtcaagaaaaataagctctatcgacctccgacaaagtttgtccct
gggtcccagaatgtctccccagtatcatccactgaaagcagaaaggctacatttaaaaga
aggacagatgaaaagaagaagagtaatctcgaactcttcaaagaagaacttaagctaata
caagaagaacgtgaggaaaggcataaaaggaagaaaaatgaccctggcacaggaggagga
agtgtaggaggtggaggaggagcatatggcgatctggatataccattatcaggtcgatca
acattatatgatgacctaactgtgccaaccaccactaacctctacatcagctgcattagc
ccaaagatgaatgaggagttgctgtgcaaagagtttggtaagtatggtcccctagccagt
gtgaagataatgtggccccgcactgacgaggagcgcaacaggacctccaacagagccttt
gtagcgttcatgacacggaaagatgcagagcgagccctggcttcacttgatggtaaaatg
attatggggtttgaaatgaagctggggtggggaaaaccagctcgcattccacctcagcct
ctctacacaccggtgggggtgagggccacgccgcctcccccttccggtctgccgttcaat
gcccagccgaggggtcgcttccgcaatgacttcactaagccgctgggcgtgtccaaaggg
gagcttgacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaat
ctattattacttattcacaggatgatagagtttgtggtgcgtgaaggacctgtatttgaa
gccataataatgaacaaggagaaaaacaatgcagagtacaagttcctttttgacaacaaa
agccaggatcatgtgtactaccgctggaaactgttttcaattctccagggtgaatccccg
acagagtggagaaccacagatttccgtttgtttcgaggaggctccttgtggagaccccct
gtcctaaacaactactctcaggaggaagaggggacagaagcggaggaggaagcttctcct
gaggaggaggtgaagaaagggcagctcagaaatgagcacaggctgagactggagatgttg
cttaaagacctcactccaagccgagaagatatagccagcaccatgctgttctctcttgag
cgggcagatgcagcagaggaagtagtgggactcatcgctgaatctttcgctttgcttcag
acgccccttcagaagaagattgccagattgtatctcgtgtcagacatcttgcataactca
tgtgccaaagtcgctggtgcatcgtactataggaaatattttgaaacaaacctaacccag
atatttgcagaccttaatgcagcacacaaaaatatacaagccaggctgcaggctgagcag
tttaagcaaaaggtcatgagttgttttagagcatgggaagactgggccatataccccgag
ccttatctcatccaccttcaaaacatctttctgggctttgccaaagcagtggaagagctg
ccggagccagcagagaaatcatcctttgagcttgatggtgcgcccatggacagcgcacca
atagatgggttacctctggaccgagctcctgtggacgacctggacggctgccccatgggc
tgggaccctctggacggagtccctgccgatgacttggatggcgttcctttaggagtcgtt
gttgatgacatcgatggaatgcccttggatgacggcaacgctcccctctccatagtgcct
ttgtctaagtgggagaagacaagtgataccgggactttttctgaagcaaaggccaagtct
aagtgggacaccgtggcggagcaagacggtgaagatgaagtgaatgtcagcgtcaagtca
caggacggggaggaggactcggagagtgacagcactgatgaagactccggcagttcagca
aaatatgaaagtgcagacttccagagttccctccgaagttttcagatgtctgagagcaaa
cgtaagaggttgagagagctggaggtgaaggttatgaagttccaagatgagctggaatct
ggcaagaggcagagaaagtctggaatgagcatacaacaacaagtggagcactacagaaac
aaactgctgcagaaggagtttgagaaagatgaagaaaagaccgagagatcatcgtcaaag
tccaaagacaggtcaaaagaggacagaaaggacaaagacaggagcaaaagaagtgaagat
ggagacagaaaacaaggacggagtcgagatcccgatgacaagactcaaaaatcgaggagt
atctctcctccaaggaataggtctcctaaacggtccaaacgttccccgtctcctgaccga
aaggcaggaaagtccagatcgcggtcacctcaccgctcccacaagaagacgaagaagagc
aaacattga
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