Hippoglossus hippoglossus (Atlantic halibut): 117774241
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Entry
117774241 CDS
T07778
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117774241 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117774241 (supt20)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117774241 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
117774241
NCBI-ProteinID:
XP_034462382
LinkDB
All DBs
Position
14:5692320..5705390
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AA seq
829 aa
AA seq
DB search
MQQVLEYALDRAEYIVESARQRPAKRRLSSGGRKSLYQKLYELYIEECEKEPELKNLRRN
VNLLEKLVSQESVSCLVVNLYPGNDGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNFFHCGCVIVEVRDYRQSGNTKMPTYQSRHILLRPTMQTLTCDVHAM
TSDHHKWTQDDKLQLESQLILATAEPLCLDPSISVTCTANRLLYNKQKMNTRSMKRCFKR
HSRAALNRQQELSHLPIPPQLRLYDYLQRRKERKPAPVIDLKISKIGNCVDMWKQSNCQL
TVPKEIDVEKYAVVEKSLQLEDSQPTTVIWPAEEVIDDYTFECEVGGQAQRTKVSIFQAM
GDPLVYGKIYCAKEPKAEEDSTDLKLIHPPFLIGSKIDADRFLTQYKGVYEKDVKCQVKM
SHNSGSVGQGPPSPSKDEGDGISPLVQTSVLGKGVKHRPPPIKLPSGSGSSSSGNPYSSQ
TTSGLLKCPTPPPAKSQSLNRKHSMELSLLSPASLSPMGSTQRSGTPKPSTPTPTNTPCS
TPHPTDSLTAPLSVTPTPSDPPLVQSQSQPALLAPFTQQQLALSQPLPVMTIPLPTMGTS
ITTGTTPSQVMANPTGLNFINVVSSVCSPQNLMSGSNPMLGPGLNLSGILPPGGLMPTMQ
SAAQSGSHFGLNSSTGLRPLNLLQIPTGPLIFNSLQQQQLSQFSPQQSQSATSSPQQQGE
TGDQGSDQSLGNQQTAVINLGVGGFMSPQAAVLSQLGCGLDGSRPPLPSPRFQQQHQPQI
QLQFLQHQMQQQQMAMGAAAPQGGVPRQHTASQPRSKRKRSTPQPLPKS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttttggaatatgcattggatcgagccgagtacattgttgaaagtgctcga
cagcggccagccaaaagaagactttcatccggcgggaggaagagtttgtatcagaagctc
tatgagctgtacatagaggaatgtgagaaagagccagagttaaagaatttgaggagaaat
gtcaatctactggagaagctggtgtcccaggagtctgtgtcgtgtctggtggtcaacctg
taccctgggaatgacggctattctttaatgctcaggggcaaaaatggatctgattctgaa
acaatccgtctgccatatgaagagggagaactgctggagtacttagatgctgaggagttg
cctcctattctggtggacctattggagaaatcccaggtcaacttcttccactgtggctgt
gtaatagtagaggtgagagactacaggcagtctggaaataccaaaatgccgacttaccag
agcagacacatcctgctgcggccaaccatgcagactctgacctgtgatgtccatgccatg
actagtgaccaccacaagtggacacaggacgacaaattgcagctggagagtcagttgatt
ttggccacagctgagcctctgtgtctggacccttccatttctgtcacctgcacagccaac
cgcctgctatacaacaaacagaaaatgaacactcgctccatgaaacggtgtttcaagaga
cactctcgagctgctctgaacaggcagcaggagctgtcccacctgcccataccaccacag
ctacgactctacgactacctacagaggaggaaggagaggaaaccggctccagtcatagac
ctgaagatctcaaagatcggaaattgtgtcgacatgtggaagcagagcaactgccaacta
actgtaccgaaggaaattgatgtggaaaagtacgctgtggttgagaaatccctgcagctg
gaggattctcagcccactactgtgatctggcctgctgaggaagttatagatgactacact
ttcgagtgtgaggtggggggccaagcacagaggaccaaggtgtcaatcttccaggcgatg
ggagatccactagtttacgggaaaatctactgtgctaaagaaccaaaagccgaggaggac
agcacagacctgaagctcatacatcccccattcctcataggctcgaagatcgatgcagac
cggtttcttactcagtacaaaggagtgtatgagaaagatgtgaagtgtcaggtcaagatg
tcccataactcaggcagcgtgggacaggggcctccctcccccagcaaagatgagggtgat
ggtatttctccactagtccagacgtctgttttgggaaaaggggtaaagcacagaccccct
cccatcaaactgccttcaggatcaggcagcagctcctcaggtaatccatacagttcacaa
accaccagtggtctgctcaagtgtcctactccccctccagccaaaagccagtctctgaac
aggaagcactctatggagctgagcctgctgtcgcctgcttccctctcgcccatgggctcc
acacagagatcgggaaccccaaagccatccacccccacgcccaccaacacgccatgctcc
accccgcatcccaccgactccctcactgctcctctctcggtgacgcccaccccctcagac
cctcccctggttcagagccagtcgcagccggccctgctcgcccctttcacgcagcagcag
ctggctctaagccagccgctgcccgtcatgaccattcccctgcccaccatgggtacgtcc
atcactacaggaaccaccccgtcgcaggtcatggccaaccccacagggctgaatttcatc
aacgtggtcagctctgtctgcagtcctcagaacctgatgagcggctccaaccccatgctg
ggtccaggccttaacctgagtggaatcctgccacctggaggcctgatgcccaccatgcag
tccgcagcacagagtgggagtcactttggcctgaacagcagcaccgggttgagaccactg
aacctcctgcagatccccactggtcctctcatcttcaactctctgcagcagcagcagctc
tctcagttctccccacagcagagtcagtcggcgacctccagtcctcaacagcagggcgag
acgggcgaccaggggtcagatcaaagtttaggaaaccagcaaacggccgtcatcaacctg
ggagtcggaggctttatgtctccacaggcagcagtgctgtcccagttgggctgtgggctg
gacgggtctcggcccccgctgccttctccaaggtttcagcagcagcaccagccacagatc
caattgcaattcttgcagcaccaaatgcagcagcagcaaatggctatgggagcagcggct
cctcaggggggagtgccacggcaacataccgccagccagccaagaagtaagaggaagagg
agcacgccacagcccctccctaagtcatga
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