Hippoglossus hippoglossus (Atlantic halibut): 117774254
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Entry
117774254 CDS
T07778
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117774254
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117774254
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
117774254
NCBI-ProteinID:
XP_034462408
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All DBs
Position
14:complement(15163234..15169732)
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AA seq
1029 aa
AA seq
DB search
MENLTPEQWREIMNKKMQFPPELIGAIQEGKIELLCGLLKTGDGIVRQLDESEDRQWREA
LNLSIRLGNEAAMVTLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTLKGHIIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAFLSVTSSDAMLSAFSLSRELRKLSQKEPEFKPQYL
GLEQLCQDFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLSRLRLAVNYN
QKEFVAHPICQQVLSSIWCGNLEGWRGSRTAWKLFVSVVIFLTMPLLCLIYWIAPKSKVG
KILRIPVIRFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIMLKAYLLCHEHSGTDDCVYF
TQTVRKDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFLLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYILRGIFRRMCCCCTCNSVQKYPAIATISNDKGSEETPLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELSKAICRMHGDIKTIQQLLTEDEHSASDLVTTK
EGSSILGKYINGARNNFRGFNSLQEDKNTSPNMTVHQEEEEVDEGKVDSHTKQETDMQQS
QVGNCGAEGSKQVTDCDVVKMEEGRVKVESGDERQTEKKKQLEAEKDENTDIKVKREGAA
GTSFNNVEGKVKGEATQDEAEKIREGEGLREATAGQTESLQVSNEKTDVKKCVNKLKDIE
LQEKKAETRWGKGKKFEHNVAEKSGVREGNDKPDAKKIIPSPTGSSSSQDTGFGSQEREG
SIDGSLVTP
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgcgagattatgaacaagaagatgcagttcccc
ccggagctcatcggtgccattcaggaggggaaaatcgagctgctgtgtggactgctgaag
accggcgacggcatcgtccgccagctggacgagtccgaggaccgccagtggagagaggcc
ctcaacctgtccatccgcctgggcaatgaggccgccatggtcaccctcctgcagggggtc
aagttcgacttccgtcagattcacgaggcactgctggtcgccgtggacaccaaccagccc
agagtggtgaagcgtctgctggaccggctagaccaagagaaaggcaacaagatggacgtg
cgctccttctctcaggccatctttgaccactccattgacaactcccagtttgcccccggt
gtgacccctctgaccttagcctgccagaaagacctgtatgacatagtgaccatgctcacc
ctaaaaggccacatcatcccgtggccacacaagatctcctgcgcctgtctggagtgtcgt
aacggccgtcagtacgacctgctgaagttctccttgtctcgcatcaacacctaccgtgga
atcgccagccgagccttcttgtccgtcacctcctccgacgccatgctcagcgctttcagt
ctcagcagagagctccgcaagctctcgcagaaagagcccgagttcaagcctcagtacctg
ggcctggagcagctctgtcaggatttcgcagttgagttactgggcatgtgtcgcaaccag
agcgaggtgaccacgatactcaacagctgcggagacgagagccaggatgccttggatcag
caggccttcgaggaggggatacccaacctgtcacgactgcggcttgctgttaactacaac
cagaaggagtttgtggcgcacccaatctgtcagcaggtgctctcatcgatctggtgtggg
aacctggaaggatggagaggcagcaggacggcctggaagctgtttgtctctgtggtgatc
tttctcaccatgccgctcctctgcctcatctactggatcgcaccgaagtcaaaggtagga
aagatcctgaggattcctgtgatcaggttcctcctccactcggcctcatatctgtggttt
ctcatcacattactcggagaatcgataacaatggagatgtatcgagacaaatttgcctcc
aggcagcagaacatcctgcacagctccttccacatggtgtgggtggttggattcttctgg
tacgagtgtaaggaagtgtggatcgaggggctgcggagctacttcctggactggtggaac
tgcttggacatgatggtgctcagcatgtacctggcgtccttcgctttacgtgtgctcatc
atgctcaaagcttacctcctctgccacgaacacagcggcacagacgactgtgtttatttc
acccagactgtgcgtaaggactggcatcaggaggacccccagctgattgcggaggtgctg
tttgcagtcaccagcatgttgagcttcacacggctggcgtacatcctgccggcccacgag
tctctgggaactctacagatctccatcggaaagatgattgacgacatgatgagatttatg
ttcatactgatgatcattggaacagccttcctctgtggcatcaacaacgtctacgttcct
tatgtcatctctccacatcttggcaggtttaatgagacgttccacttcttattctggacc
atgttcggtgtggccaaccaggactacgtggacatgccacagtttttgttggcagagttt
gtcgggaggattctctacggcatcttcacgctcgtcatcgtcatcgtcctgctcaacatg
ctcattgctatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aagtttgcccggtcaaagctgtacctcagttacttcagagagggcctcaccatgccggtg
cccttcaacatcatcccctcacccaaagctttcttctacatcttgaggggtatcttcaga
agaatgtgctgctgctgcacctgtaattctgtgcaaaaatatcccgctatagccaccata
tccaatgataagggatctgaggaaacccccttaccgtaccggcagcaagtgatcagggct
ctggtgcagcgctacatcgagtcggctcgcagagagttcgaggagaccaagaggaaagac
atcggtaaccgcatcactgagctgagcaaagcgatctgcaggatgcacggtgacattaag
acgatccagcagctgctgacggaggacgaacactctgcaagcgatctagtgacgacgaag
gagggctcctccatactggggaaatacatcaatggtgccaggaacaatttcagaggtttt
aacagcttacaagaggacaaaaacacgtcacctaatatgacagtgcaccaggaagaggaa
gaggtggatgaaggcaaagttgactcacacacgaaacaggagacagacatgcagcagagt
caggtgggaaattgtggcgcggagggatcgaagcaggtgaccgactgtgacgtggtgaag
atggaggaaggcagagttaaagtagagtcaggagatgagaggcaaactgagaaaaaaaag
cagttggaagcagaaaaagatgaaaacactgacattaaagtgaaaagggagggggcagca
gggaccagcttcaataatgttgaagggaaggtgaaaggcgaggccacacaggatgaggca
gagaaaataagggaaggggagggactcagagaggccaccgctggacaaactgagagcctc
caagtcagcaatgagaagacagacgtaaagaaatgtgttaacaagttgaaagacatagag
ctgcaagaaaaaaaagcagagacgagatgggggaagggcaaaaagttcgagcacaatgta
gcagagaagtctggcgtcagggagggcaacgacaaacccgacgccaagaaaatcattccc
tcgccgacgggcagcagcagctcccaggacacgggctttggttcgcaggaaagggaggga
tccatcgatgggtcgctagtgacaccgtaa
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