Hippoglossus hippoglossus (Atlantic halibut): 117774314
Help
Entry
117774314 CDS
T07778
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117774314
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
DSCAM family
117774314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
117774314
NCBI-ProteinID:
XP_034462535
LinkDB
All DBs
Position
14:complement(15467867..15523262)
Genome browser
AA seq
2117 aa
AA seq
DB search
MGGAEAPLIPPPCLAGQQGWRDLRGAQSPVQHGDSPPGHRTAPHTCQDCQTFLRNIPALY
GMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRW
YLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRI
KAVFREPYTVRVADQRSMRSNVAVFKCLIPVAVQEYVSVVSWERDTVSIVPGNRFSLTSF
GALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVQA
GQSIELPCTAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRLEDSGSYACEVTNS
FGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYAITWYRNTEPINPDQ
HISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVV
NPGEPFSLMCGAKGAPPPAITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRD
GGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWL
KDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLI
QPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQIS
KVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFTVQPNNQDCIYGKAGVLNCSVEGYP
PPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDI
SKSMILTVKIPAMITSHPNTTMARKGQTKDLNCTARGEQPIIIRWERGDTVIDAERNPRY
SITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVRE
VKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACV
YSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNG
VIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPS
STEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDG
GGCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYI
QTREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEAN
PEMLFYRITHLSRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPGKILSFGGTVTTPWM
KEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVKAEDSGYYTCT
ATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDN
TEEWRDVFISSTERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKD
QPLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTTQLFLSELREA
TWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTL
GVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQL
LIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRP
GTNPVSRKSIKSAHSSRNRYSSQWTLSRPTQSQSTASARTLTSDWRTMGSHGITATESDS
YSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSD
QMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLP
LYMKTDPFFRKQGELHDPCPVVPPREASIRSLTQRAYHTQGRHKTLDPTKQPSLTLGHSG
LSSLGSSLGTATLPQRTLIMPSSNTAATASTSSTGSNPTNSNKVGGSRDSLLESSSSALG
RLQKQSAGAYSKSYTLV
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggctgaggcgcctctcattccccctccatgcttagcggggcagcagggctgg
agagacctccggggagcacagtcgccagtccagcacggagactcgccgcccggccacaga
accgctcctcacacttgccaggattgccaaacattcctgagaaatatacctgctctttat
ggcatgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggat
gtgggctctaccaggctgtactttgtgaacgcctccctgcagagggtaacctactccagc
tcggtgggggtgtccctgccctgtccagcagggggcacccccagtgccatactgcgctgg
tacctggccaccggcgatgacatctacgacgtgccgcacatccgccacgtgcacgccaac
ggcaccctgcaactgtaccccttctcgccctcggcctacaacagctacatccacgacaat
gactacttctgcactgccgaaaaccaggccggcaagatccggagccccaacatacgcatc
aaagctgttttcagggagccctacaccgtgcgagtggcggaccagcgctcgatgcggagc
aacgtagccgtgtttaagtgcctcatccccgttgccgtgcaggagtatgtcagcgtcgtg
tcctgggagagagacaccgtgtccatcgtcccaggtaacaggttctctctcacctccttc
ggagctctttacatctctgatgttcagaaggaggacgccctctccacataccggtgcatc
accaagcataagtacagcggcgagacgcggcaaagcaatggagccaggctctccgtaatg
gaccccaacgagtcctcgcccaccatcctggacagcttccaagcaggggaggtgcaggca
ggccagagcatcgagctcccctgcaccgcaggaggttaccccagccccaccgtacgctgg
ctgaaagatggtcgccccttgccctcagatgcccgctggacacggcgtttgacagggctg
accatcagtgacctgaggctggaggacagtggcagctatgcctgtgaggtcaccaacagt
tttggctcaaaggaggtgtctggacagcttcacgttatagatccactacgtgtgacctta
tcgcctaagaacctgaaaacaggcatcagcagcacactgtttttcacctgcactgtggag
ggctctcctgaatacgccatcacctggtacaggaacacagagcccatcaaccccgaccag
cacatctccatccaggggcaacacaacgacacgctgcagatcactgcggcacagaagttc
cactccggggcctaccagtgcttcgcctcccgaaagggccacactgctcaggacttttcc
attatactgctagaggatggtactcctcgtatcgtgtcttccttcagcgagcgggtggtg
aaccccggcgagcctttctccctcatgtgcggggccaaaggagccccacccccggcgatc
acctggaccttggacgacgagcctgtggttcgggactccacctacaagaccagccagtac
accctgtcggacggcttgaccgtgtcgcacgtcaacgtcagcagcccgctcatccgggat
gggggagtgtaccgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggtccacctcgaatcagacccatgcgggacatcaccgcagtggcgggc
aggaacacctacataacgtgccgcgtgattggctacccgtattattccatcaagtggctg
aaggacggcatgcagctgcccgataatcaccgtcaagtggtgttcgagaacggcaccctg
aggctgacggacgtgcagaagggcgccgacgagggcacctacttgtgcagcgtcctgatc
cagccccaggtgtcgatcaaccagaccgttcacgtaactgtcaaagtgccgccgctcatc
cagccctttgatatcccctctacctcagtggggaagctcatgtacatcgcctgcgtggtg
tcatccggggacatgcccatacgcatcacctggcacaaagatggccagctcatcgtgccg
ggctccgcctctggcgtcggaatcgagaccaaagagttcatgagctccctccaaatctcc
aaggtgacactgaagcacaacgggaattacacctgcatcgccagcaatgccgccgccacc
gtcagctgggagaggcagttgatcgttaccgtgccaccgcggtttacggtgcagcccaac
aaccaggactgtatctatggcaaagctggagttctcaactgctccgtggaaggttatcca
ccgccgaaagtcatgtggaaacacgccaaaggtgtgggaaaccctcagcagtaccaccca
gtccctctaaccggccgaatccagatcatgtcgaacggctctctgctcatccgacatgtt
ctcgaggatgaccgggggtactacctctgtcaggcctccaatggagtgggctcagacatc
agtaagagcatgatcctcactgtcaagattcctgccatgatcaccagccaccccaacacc
accatggcaaggaaaggccagaccaaggacctgaactgcacagcgcggggcgagcagccc
atcatcatccgctgggagagaggggacaccgtcatcgacgcagagaggaacccgcgttac
tccatcaccatcaacaagaaaggggacgaagtcatctccaccctcaagctgaacccagcc
gaacgaggagattctgtcttcttctcctgccatgccatcaactcctatggagagggtcga
ggtcttatccagctcactgtgcaagaaccaccagatcccccggagctggaagtgagggaa
gtgaaggacaggagcatgaacctgcgctggatccaacggtttgacggaaacagcatcatc
accagctatgacatcgagtataagaacaagtcagactcctgggatcacatgtacacaacc
aggaatatctcacccaccaacaaccaggccaacatcgtagagctgcacccggcctgcgtt
tacagcatccgcatgtactcctacaacaagattggccgcagccttcccagcaaagagctc
acgatcagtactgaagaagcaccaccagacgggccgccaatggatgtaatcctccaaccg
atgacatcccagagcatacgggttacatggagggcgccaaagaaggagctgcagaacggg
gtgatccgaggttaccaaatcggttacagggagaacggtccaggcagcaacggacagtac
agcatagtggagatgaaagctacaggggacagtgaagtgtacaccttggacaacctaaag
aagtttgcccagtacggggtcgtggttcaggccttcaacagagccgggacgggcccatcc
agtactgagatcaacgcgaccacgctggaagacgtgcccagcgagcccccgcagaacgtg
cgagccatctcggtgacgtcggacgaggcggtgatcacgtgggccgagcctccacggctg
acgctgcacggtgtgctgaaaggctaccgtgttgtgttctggtccctcttccctgacgga
ggtgggtgctgtgggggccaggcccagtggccgatgcagaaatggggggagatgcagaac
atcaccacgacccgtgagcaggtggagctgcgagggttggagaagttcaccaactacagt
gttcaggtgctggcctacacgcaagccggagacggggtccgcagcaacgtgctgtatatc
caaacccgcgaggaccttcctggaccgccggctggaattaaggcagttccctcgtctcca
agtagcgtggttgtgtcctggttaccaccccacaaaccaaatggtgtaatccgcaagtac
accatctactgctccagtccaggttctggacagccagcgcccagcgagtacgaggccaac
cccgagatgctcttctaccgaatcacgcacctcagccgcggtaaacaataccacatctgg
gctgcagccgtgacaactgccggccgtgggaacatcagctcaaaggtcacagtggagcct
gctgggaaagtcccgggtaagatcctgtccttcggtggcacagtgaccacaccctggatg
aaggaagtacgtctgccctgcagctcggtgggagagcccgcccccacgattaaatggacc
aaagacagtgaggactctgccattccagtgacggccgacagccagcggcagatcttatcc
aatggcacgctggtgctgcgttcagtcaaagcagaggactctgggtactacacctgcacg
gccactaacacgctgggctttgacaccatcatagtcaatcttgtggtgcaagttcctccg
gaccagcctcgcctgactgtctccaccacctccacctcctccatcaccctggcttggatc
ccgggggacaatggaggaagctccatcagagggtttgtgctgcagtattctgtggacaac
acggaggaatggagggatgtgttcatcagctccactgagcgctccttcaggctggacaat
ctgcgctgcggaacctggtacaaggtcaagctggccgccaagaacagcgtgggctcaggg
cgcatcagtgagatcatcgaggccaagacccacggaagagagccggtgttcaacaaggac
cagccgttactcacccacatcaactccacacacgcagggctcaacctgcagggctggacc
agcggcggctgtcccatcaccgacatgatgctggacttcagacctaaaggcacctgggcc
tggcagagcctcaaggccaactccaccacgcagctcttcctcagcgagctgcgggaggcc
acgtggtacgagctcaaaatgaaggcctgcaacagcgccgggtgtggcaaccagagctcc
cagtttgccaccaccgactacgatggcagtacaatcccccccattaaatcagcccgtggc
gaaggcgatgatgtgaaaaagctcttctccatcggctcccccgtcatcctggttactctg
ggtgttgcgttgctcttcattatccgcaagaaacgcaaggagaagcggctcaaacgtctc
agggatgctaagagcctcgctgagatgcttatcagcaagaacaatcgcagtatagacacg
cctgtgaagggccctcctcaagggccgaggctccacattgacatcccacgtgttcagctg
ctcattgaggacaaggaaggcatcaaacagataggcgaggacaaggcagcggtgccagtg
acagacacagagtttagccaatcagtaaatccacagaacttctgcacaggcgtgtctctg
caccaccaagccctcattcagaattcagggcctttgattgacatgtcagacatccgtcca
ggcacaaaccccgtgtccaggaagagcatcaaatccgctcacagctcccgcaacagatac
tccagccagtggacgctgagccggccgactcagagccagtcgacggcctcggcacgaact
ctgacctcggactggcgaacgatgggctctcacggcatcactgcgacggagagtgacagc
tacagcgccagcctctcccaagacacagataagggtcgcaacagcatggtgtcgactgag
agcgcctcctccacctacgaggagctggcgagggcctacgagcacgccaagctggaggag
cacctgcagcatgccaagttcaccatcacggagtgcttcatctccgacagctcgtctgac
caaatgaccacaggaaccaacgacccagcggacagcatgacctccctcagcacgccgtct
gaaccgggcatctgccgcttcaccgcctcgccgcctaaaccgcaggactacgaccgtggt
aaaaatgtggctgtgcccattccccaccgcgccaacaaaagtgaattctgcaacctcccc
ctctacatgaagacagacccattcttccgcaagcaaggggagctccacgacccatgcccg
gttgtgccgccacgggaagcctcgatccgcagcctgacgcagcgggcgtatcacacccag
ggccgtcacaaaactctggaccctaccaagcagccgtccctgacgctgggccactctggg
ctgagcagcttgggttcgagcttgggcaccgccaccttgccccaaaggactctcatcatg
cccagctccaacaccgcagcaacagcttccacttccagcacaggcagcaaccccaccaac
agtaacaaggtggggggctccagagactcgctgcttgagagcagctcctctgcactgggg
agactgcagaaacagagtgcgggggcctactccaagtcatacacactggtgtag
DBGET
integrated database retrieval system
