Hippoglossus hippoglossus (Atlantic halibut): 117774335
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Entry
117774335 CDS
T07778
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04142
Lysosome biogenesis
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117774335
04142 Lysosome biogenesis
117774335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117774335
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
117774335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
HEAT_MROH2B_C
HEAT_GCN1
NELF-A_N
Arm_2
HEAT_spiro
PIK3R4-like_middle
API5
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
117774335
NCBI-ProteinID:
XP_034462578
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All DBs
Position
14:11601190..11615347
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AA seq
953 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPSAFVEGSHGIHRKHLPVQHSSI
DTGESPVSGGPAATMEQPHVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGL
DSLLGGDLGGGVGGSPAVGQNFIPSSVPSTFAPSPTPAPPAVSSGLNDLFEISTGMANTT
GGHIAAKSVWLPAVKAKGLEISGTFSRRQGHMYMDMTFTNKALQHMTDFAVQFNKNSFGV
IPTTPLAVHTPLMPSQSIEVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSVLIPLYV
FFVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNNNIYTIAKRNVEGQ
DMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYVYLMYDSVLKN
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggactccaaatatttcacaacgaacaaaaaaggggagatctttgaactgaaggca
gagctgaacaatgagaagaaggagaagagaaaagaggctgtgaagaaggtcattgcagcc
atgactgttggcaaggatgtcagttccttgtttccagatgtggtgaactgcatgcagact
gacaacctggagctgaagaagttggtttacctctacttaatgaactatgccaagagccaa
cctgacatggccatcatggctgtcaacagctttgtcaaggactgcgaggaccccaaccct
ctcatccgagctctggccgtccgcaccatgggctgcatccgggtggacaaaatcacagag
tacctgtgtgagcctctgaggaagtgcttgaaggacgaggacccttacgtgaggaagacg
gcagctgtgtgtgtggcgaaacttcatgacatcaatgcccagatggtggaggaccagggc
ttcctggactctctgagagatctcattgctgactcaaatcccatggttgtggccaatgca
gttgctgccctgtcggagatcagtgagtctcaccccaacagcaacctgctggatctcaat
ccccagaacatcaacaagctcctgacggccctcaatgagtgcacagagtggggacagatc
ttcatcctggactgcctgtccaactataaccccaaggatgagcgtgaggcccaaagcatc
tgtgagcgtgtaactccccggctgtctcacgccaactcagccgtggtgctgtcagctgtc
aaggtgctgatgaaattcttagagctgctgcccaaggactccgactactacaacaccttg
ctgaagaagctgtccccaccactggtcaccttgctctccggagagccggaggtccagtat
gtggctctgaggaacatcaacctcattgtccagaaaaggcctgagatcctgaagcaggag
ataaaggtgttctttgtcaaatacaacgacccaatctatgtgaaactggagaaactggac
atcatgatccgcttggcctctcaggccaacatcgcccaggtgctggctgaactgaaggaa
tacgccacagaagtggatgttgactttgtgcgcaaggctgtccgagccatcggacgctgt
gccatcaaagtagagcaatcagcggagcgctgtgtcagcactctgctggacctgatccag
accaaagtcaactacgtggttcaggaggctattgtggtcatcagagacatctttcgcaag
taccccaacaagtatgaaagcatcattgccacactgtgtgagaacctggactctctggac
gagcctgacgctcgtgctgccatgatctggatcgttggtgaatatgcagagaggatcgac
aacgctgacgagttgctagagagcttcctcgagggtttccatgacgagagcactcaggtc
cagctcactctgctgactgccattgtgaagctgttccttaagaagccatcagagacccag
gagttggtgcagcaggttctcagtctggctactcaggactctgacaaccctgacctgcgt
gacaggggctacatttattggcgccttctgtccaccgaccccgtgaccgccaaggaggta
gtattgtccgaaaagcccctgatctctgaggagacagacctgattgagcccaccctgctg
gatgagctcatctgccacatcggctctctggcctccgtctatcacaaaccccccagcgcc
tttgtggagggcagccacggaatccaccggaaacaccttcctgtccagcacagcagcatt
gatacaggtgagagcccagtgagcggtgggccggcagctaccatggagcagccacatgtg
atccccagccagggtgacctgctgggtgacctgctcaacctggacctgggccctccagtc
aatgtgccccaagtgtcctccatgcaaatgggtgcagtggaccttttgggaggaggcctg
gacagcttgctggggggagacctgggcggaggtgttgggggaagtccagcagtgggacag
aacttcatcccctcgtctgtccccagcacttttgctccctcacctacaccagcaccgccg
gccgtcagcagcggcctcaacgacttgtttgagatttccacaggcatggccaacaccacc
ggaggccacattgctgcaaaatcagtgtggctgcctgcagtgaaagccaagggactggag
atctctggaaccttctctcgccgccagggccacatgtacatggacatgaccttcacaaac
aaggccctgcagcacatgaccgacttcgctgtccagttcaacaagaacagttttggcgtc
atccctaccactcctcttgccgtccacactcctctgatgcccagtcagagtattgaggtc
tctctgcctctcaataccatcggaccagtcatgaagatggacccactcaataatctgcag
gtggctgtgaagaacaacatagatgtcttctacttcagcgtactcatccctctctacgtt
ttctttgtcgaggatggaaaaatggagcgacaggtgttcttagctacctggaaagacatc
cccaatgagaatgagctacaatatcagataaaggagtgtcacctaaatgcagacacagtg
tcggggaagctgcagaataacaacatctacaccattgccaagagaaacgtagaaggccag
gacatgctgtaccagtccctcaagctgaccaatggcatctggatcctggctgagctccgc
attcagcctggaaaccccaactacacgctgtcgctcaagtgtcgggcacctgaggtttct
cagtacgtctacctgatgtatgactctgtgctgaagaattga
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