Hippoglossus hippoglossus (Atlantic halibut): 117774470
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Entry
117774470 CDS
T07778
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
hhip04148
Efferocytosis
hhip05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117774470 (vps11)
04148 Efferocytosis
117774470 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117774470 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117774470 (vps11)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117774470 (vps11)
Hops complex
117774470 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
Beta-prop_WDR3_1st
zf-rbx1
Beta-prop_WDR36-Utp21_1st
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
zf-ANAPC11
Beta-prop_EML_2
ADIP
zf_RING_Vps8_fungal
Rab11-FIP3
zf-RING-like
TSGP1
Kbp-5
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
117774470
NCBI-ProteinID:
XP_034462806
LinkDB
All DBs
Position
14:complement(24068451..24085594)
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AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPVDNGKNCVLPSGVSACDSGRGHIVLGDMDGKIWLMTRSL
QLTFFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLGVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCGLRCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAKWHRGYLFLLIRDAKSPNKAGFGSRESSPSEKQLLTIYD
LDNKFIAYSSSFDDVVDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSDSEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESTMKHYGKTLMHHV
PEGTTLLLKGLCTTYQPSGDAGEKGSPERSRVNKANSEEFIPVFANNPRELKAFLEHMIE
VDPRSSQGVYDTLLELRLQDWAHEQDPERKKVLQGEAVSLLRSDHTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKICQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFSRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
LPGSKTVGNLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcttacagtggcggaaatttgtcttcttcgacaaagacacggtgaaggat
ccggtggataatgggaagaactgtgttcttccgagcggagtctcggcctgtgactcgggc
cgtggccacatcgtcctgggagatatggatggcaagatctggctcatgacgcgctccctg
cagctgaccttttttcaggcctacaagctgcgagtgacacacctttaccagctgaagcag
cacagcatcctggtgtcagtggggcaggatgaacaaggaataaaccctctagtaaaggtc
tggaacctagacaagagagacagtggaaatcctctctgcaccaggatttttcctgcgatt
cctggcaacaaaccgactgaagtgtcttgcctcggtgtgcacgagaacctcaacttcatg
gccatcggcttcacagatggcagtgtggttttgaccaaaggtgacatcaccagggatcgc
cacagtaagactctaacactgcacgaggggagcagcccagtcactggcctcgccttccgc
caagtggcaaaggtcacacatctgtttgttgccactctggagaaggttcattgctacacc
ctgtccatcaaggagtatccaaaagttgagcttgatacacatggctgtggactccgctgc
tcctcacttgcagatccttcccaggattcccagttcattgtggccggtgatgaatgcgtg
tacctgtatcagcccgatgagcgagggccctgcttcgccttcgatggacacaagctgctc
gccaagtggcaccgaggttacctgtttttactcatcagggatgcaaagtcaccaaacaag
gcagggtttggtagcagggagagctctccatcagaaaaacagcttctcaccatctatgac
ctggacaacaagttcattgcctacagttcctcttttgatgatgtcgtcgatgtggtggca
gagtggggctccttttacatcctaaccagggatggaaaaatgtttgttcttcaagagaaa
gacacacagaccaagctggagatgctgtttaaaaagaacctgtttgtgatggccataaac
ctggctaagagccagcacctggacagtgacggcctgtcagagatcttcaggcagtatggg
gaccacctctatttaaagggagaccatgacggtgccatccagcagtacattcgcaccatt
gggaaactggagccatcgtacgttatcaggaaatttctggacgcacagaggatccacaac
ctgacggcatatctgcaggccctgcacagacagtcactggctaacgcagaccacaccaca
ctgctgctgaactgttacacaaagctgaaggacagctccaagctggaggagttcattaag
agtagtgacagtgaggtccactttgatgtggagattgccatcaaggttctaaggcaggcc
ggctaccacagtcacgctgttttcttggctgagaagcacatgcaccatgaatggtacctg
aagatccagctggaggacctcaagaattatcaggaagggctacgttacatcggacgtttg
ccttttgaacaagctgaaagcaccatgaagcattacggcaagacgctgatgcaccatgtt
cctgaaggcaccacactgctcctgaagggcctgtgcaccacctaccaacccagtggagac
gctggtgaaaaaggcagcccagagaggagtcgcgtcaataaggccaactctgaggaattc
atcccagtttttgcaaacaaccctcgagaactgaaagccttcctggagcacatgatcgag
gtggacccccgttcttcccagggtgtgtatgacacactgctggagctccggctgcaagac
tgggcacatgaacaggacccagagagaaaaaaggtcctgcagggggaggcggtgtcactg
ctgaggagtgaccacactgtgtttgataaagccctggtcctgtgccagatgcacaacttc
aaagaaggtgtcctctacctttatgagaagggcaaactgtaccagcagataatgcactac
cacatgcagaatgaagagtatggaaaagtggtagaggcctgcaagcgctatggggatcaa
gagggttgcctctgggagcaggcacttggatactttgctagaaaagaagaggactgcaag
gcctacatcagtgaggtcctacatcatatcgaccaaaacaacctgatgcctcccttactt
gtggtgcagacactggcacacaactcgacggccactctctccgtcatcaaggactacctc
atcaacaagctgcagagggagagccagcagatagaggacgatgaacgcaaaatctgccag
taccgcgaggaaactgctcacctccgttctgagatccaggagctcaaaacaagtgccaag
atattccagaagaccaagtgcaacatgtgcaacagtcccctggagctgccctctgttcat
ttcctgtgcagtcactccttccaccaacactgcttcgaaagctacgctgagagtgaggct
gagtgcccaacgtgcacccctgagaaccgaaaagtcatggacatgctgcgtgcacaggac
cagaaacgcgacctgcacgaccacttcagcagacagttacgcagctccaacgatggtttc
tcagtggtggctgactattttggtcgaggagtgttcaacaaactgactctggtcactgac
ctgcctggcagcaaaacagtcgggaatctagaagtcaacctgcagagagacctgctcatc
cacaccaagaggaactgctag
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