Hippoglossus hippoglossus (Atlantic halibut): 117774513
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Entry
117774513 CDS
T07778
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117774513 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117774513 (alcama)
04090 CD molecules [BR:
hhip04090
]
117774513 (alcama)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
ALCAM
117774513 (alcama)
CD molecules [BR:
hhip04090
]
Proteins
117774513 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
C2-set_2
I-set
V-set
C1-set
Ig_4
tRNA_Me_trans
MSP1a
Syndecan
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
117774513
NCBI-ProteinID:
XP_034462880
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All DBs
Position
14:24439102..24501234
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AA seq
562 aa
AA seq
DB search
MAPSALLLLLAAVSAGTLVQAVLGTNTVTALYGETIVIPCNNGAAVPEDLMFIKWKYEKD
DGTPGDLLVKQASNEQATVQATDDYARRVSIDKKSNLLITQATLKDQKTFTCMIVSVNNI
LEFPVPVAVHKKPSSVQILDKAEVLQRDKPTTVGTCVATDANPAATITWTKNGQPLVVDG
KATVITPSMKLDPATGLSTTSSMLQYVATKEDVGAVFACMATHEKTNQETVLEPIPIHYP
SEKVSLQVMSKRPIVEGDNVTLKCHADGNPPPSSFFFHIKGKKILVENSDNYTLVAINRE
AAGEYKCTLTDNEKLEASQSIDVGYLDLSLSLTGKVDKRLGDTLSVKMEKNSSGDAKVSW
TKNGKAVKEPEFSKLSYADAGLYLCEVSMTGLTRRQSFELVVEGKPVITSLTKVRAIDAE
HKVLTCEAEGVPEPSFQWSVNNTKEESSYINGKATHKITVVPNMNLTVSCSVSNRLGDDI
MTINVSSVFKEEREEKGSQDDSDDQSKLIVGVVAGLLIAAAVIGLIYWLYVKNARQGSWK
TGEKELGTSEESKKLEENNHTV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtctgccctgctgctgctgctggccgcggtcagcgccgggacgctcgtccaa
gcagtgttgggtacaaatacagtgactgctttgtatggagagaccattgttataccgtgc
aacaatggagctgcggtaccagaggatctaatgttcatcaagtggaaatatgaaaaagac
gatggcactcctggcgatctgttggtcaaacaggccagcaatgaacaggctacagttcag
gccacagatgattatgcccggcgggtcagcatagataaaaagtccaacctgctcatcacc
caggccacacttaaagaccagaagaccttcacctgcatgattgtgtcagtcaacaacatc
ctggagttccctgtccctgttgctgtccacaagaaaccgtcatctgttcagattctggac
aaggctgaagtacttcagagggacaaaccaacaacggtgggaacgtgtgttgcgacagat
gcgaaccctgcagctacgattacatggacaaagaatggacagccattggtagttgatggg
aaagccactgtgatcaccccgagcatgaagctggatccagccacaggcctttccaccacc
tcctccatgcttcagtatgtagccaccaaggaggatgttggcgcagtgtttgcctgcatg
gccacacatgagaagaccaatcaggagacggtcctggaacctattcccattcactatcca
tcagagaaggttagcctccaggttatgtccaagaggcccattgtagaaggagataatgtg
acgctgaagtgtcacgctgacggcaaccctccacccagctccttcttcttccacatcaag
ggcaagaaaatactggtggaaaattcggacaactacactttggttgccatcaacagagag
gctgcaggcgaatacaaatgcaccctgactgacaacgagaaactggaggcctcccaaagc
atcgatgttggctaccttgacctgagtctgagtctcactgggaaggttgacaagagacta
ggggacaccttgtctgtgaagatggagaagaacagctcaggggatgccaaagtgtcttgg
acaaagaatggaaaggcagtgaaagagccggagtttagcaagttgagctatgctgatgca
ggactgtacttatgtgaggtttccatgaccggcctcacgcgccgtcagagcttcgagctg
gtcgtagaagggaagcctgtgatcaccagtctgaccaaagtccgggctattgatgccgaa
cacaaagttctgacctgcgaggctgagggagtaccagaacccagcttccaatggagtgtc
aataacactaaggaggagagctcctatatcaatggcaaggctacccataaaatcactgtg
gtcccaaacatgaacctgactgtcagctgcagtgtcagcaacaggctgggagatgacatc
atgaccatcaatgtttcctctgtttttaaggaggaaagggaagaaaaaggctctcaggat
gattcagacgaccagtcaaagctcatagtgggtgttgtagcagggctcctcatagctgct
gcagtaattggactaatctactggctctacgtgaagaatgcaaggcaaggaagctggaaa
actggtgagaaggagttggggacatctgaggagagcaagaaactagaggaaaacaatcac
accgtttaa
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