Hippoglossus hippoglossus (Atlantic halibut): 117774538
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Entry
117774538 CDS
T07778
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117774538 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117774538 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117774538 (vps36)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
117774538 (vps36)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117774538 (vps36)
Exosomal proteins of colorectal cancer cells
117774538 (vps36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
MA3
Motif
Other DBs
NCBI-GeneID:
117774538
NCBI-ProteinID:
XP_034462927
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All DBs
Position
14:complement(11679549..11685093)
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AA seq
382 aa
AA seq
DB search
MDRFFWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDVKNHECCIA
MPLSQILFFEEQAAGIGKSAKIVIHLHPAPANKEPGPYQHSKYPFIKLSFKEHGQIEFNR
RLTEEMTQKRWESTPVSQPIPTGTGSQTGKTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIADPVTRETHGSGTH
YHLQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLQLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttttttttggtcaaacgggcttttggaaataaacgaaactttagtgatccaa
cagcgaggcgtgcgactgtatgacggcgacgataaggcgaagctggacgttggagttgcc
ctgttgagcacccaccggctgatctggagggacgttaaaaatcatgaatgctgcatagcc
atgcccctgtcacagatcctcttcttcgaggagcaggctgcaggaatagggaagagtgca
aaaatagtcattcacctgcatccagcacctgccaacaaggagccaggtccctaccaacac
agcaaatatcccttcatcaagctgtcgttcaaagaacatgggcagattgagtttaacagg
aggctaacagaagagatgactcagaagagatgggagagtacaccagtgtcacaacccatc
cccacaggaacaggttctcagacaggaaagacacgtgcggtggggattgttggcatcgag
aggaagatagaggagaagaggaaagaaacagacaaaaacatttcagaggcctttgaggac
ctcagtaagctgatggtgaaggccaaagagatggtggagttgtccaggtctatagccaac
aagattaaagacaagcagggagacataacagaagatgagacaatccggtttaagtcttac
ctactcagcatgggtatagctgaccctgtcaccagggaaacacatggatcgggcacacat
taccacctgcagctggctaagcaactgggagatatgctacaagcccctctagaggagcgt
gggggaatgatggctctcactgaggtgtactgtctcgtcaaccgtgctcgagggatggag
cttttatctccagaagatttggtcaacgcctgcaagatgtttgagtcgttgcagctccct
ctgaggctgcgtgtgtttgacagtggtgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatcgcctctgcactggacaacgtgtcagataaaggttcgttgacagctgag
gagtttgcaaaactcttgggtctctctgttcttctgtctaaggaacggttgctgctggct
gagaagatgggtcacctgtgtagagatgactctgtcgagggtttgagattctacccaaac
ctcttttga
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