Hippoglossus hippoglossus (Atlantic halibut): 117774798
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Entry
117774798 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117774798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117774798
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117774798
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
Collagen
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
117774798
NCBI-ProteinID:
XP_034463342
LinkDB
All DBs
Position
14:3357825..3370281
Genome browser
AA seq
1914 aa
AA seq
DB search
MAASAATASCSPGLCPNYAVICSFLERYGALLDLPELTFPQLERCLQDTAAVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKVCQEFNTTWAWELEEKGYKEMTLESKTAILKYLCECQF
DENVKFKTAINEEDPDKMRLQPIGRDKDGQMYWFQLDQEDNVRVYIEEQDDSDGSSWKCI
VRERNDLAEVVALLKTQIDPELLRRDELKKENNPDGEGDKKGEAKKSDSSSDEDHKDPNK
AACPVSPKTENNEKETQKENLKSEASEVKSLNGIIESKSEAELLSENIGTKAQSIKEEPM
EVTDIKTATCEPASVTSCLSVKAEKGEEVKRNSAEEIQQALKNDQQAKIPLKKRGMKFSE
DFEKTTANTVQTQFVSQVRDAPKEDCGPKEDAAPKEDAGPKEDAGPKEDAGPKGDAGPKG
DAAPKEDAGPKGDAAPKGDAAPKGDAPPKEDAGPKEDAGPKGDAAPKGDAAPKGDAPPKG
DTPPKGDAGPKEDAGPKGDAAPKGDAAPKGDTAPKGDAAPKGDTAPKGDAGPKGDALPKG
DALPKGDAAPKGDAAPKGEAGLKGDAAPKGEAGLKGDAAPKGDAAPKGDAAPKGDTGLKG
DAAPKATLLLKATLLEKELQSLSETLKDVAAANKEQTTEPSVVKSVEARENDSKSTEKEA
KDKKDEAGSAKVTEEVASHQENSDKKNLEKENDAATEKKEAHESPPPPKGESPPLPKDGS
NAPEESSNHEDCEKTKESPADTEESSAASLKETDKTLTTAESEKLNLNHEATSKDPESKD
SQEKPACADASESSQTKETDETETSNRTENMKRTVSDKESETSETNTEKSDKLATKATPG
VIKTTETQAAGKDPPKEPEDSENTESQSIIKKTETVKDGNDAEDQEITQTSTVIKKVDKE
TVSEKSEETPDVKESAESSVIKTVEKSESCKLAEKQPSVTVAETTPEENSAASEKLDKTE
KPEDTKKTVNCEDNMIHDVTKISDSTSEPMEVEAAAVKQDLTNPREDDETKTNSVEHETK
EETSEGKDKPSSPVEKTDVAGETDKKPNKEEEKEPEEPSKPMETEQPSSETKTDSDKGSE
KDADSEKLTNDPEKILSQEKESKEDSTIDKTSETDKNSESKEAEAESSTGTEKPAHPSKE
PPTDKPEDEESKSEEEDSNTKKEVANGSEAPAGVREAAIRRKRKRPAHRRKVVVKRVERQ
GDSESDTNTGRSLRRSPRISRPTPKVVEIHDRKLEKSQATPPTEKEEDDKAEKEKDEEEE
EEEDAVKVVQRKPREKKVDQEGQPKPKGRKRRKVCWSNTRTRRKKKTSEDEEDNSEEASS
EEDSGDVDDSDEDYKVERSKRRRNRNRERRSSASSTSSDDDLPPNDDPCKHCGLPNQPEL
ILLCDSCDSGYHTACLRPPLMIIPDGEWFCSPCQHKLLCEKLEEQLQNLDASLKKKERAE
RRKERLIYVGISVENIITPSVEAEEEKPEIVIKEKKEVKRSKSWGRRSTRTKKNISYRFD
EFDEAIEEAIEEDIKEAEGGGAGRGKDMANITGGHRGKDMSVILQADEENKENGRPPPIS
SAQRKRKRRRLNDLDSDSTVDEEESEEEFRISESSEEEFVVSENESDAENDSNNSDFGSN
GSGRRHTSSRKRKPPKRRRSSRKRRRPKGYSDDEEEETDEDEDDEMATEGSSEFSDSDLD
MSRRRSRRSQKKQVNYCETSESDGSRAENKRVTKKPGPPRDSSESEASSSRDSEEEPSER
RVKRRADSSEEDSRQRHRRLALKRRRASEDDSSDDSSDDSSEEDRPVRKRVNRIDSDDDD
EEEEEEKPKEKKPEEEKKPEEESKGTNPSDCNAVELPPTNGQSPVKNVEGVISRPAAPGT
VHKQEPPKTISAAPATAIAPNGVAGQEMAAQEDDEDDLLGVTDLVDYVCNNEQL
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacggcgagttgttccccgggtttgtgtccgaattacgccgta
atctgctccttcctcgagcggtacggagccttgctggacctgccggagctcaccttcccg
cagctggagcgatgtctgcaggacaccgccgcagtcccgaagctgctggtcgatcttcac
gtgaagctgctgaggaagatcggcaagtcggtgtcagcagaccgatgggagaaatatctg
gtcaaggtgtgtcaagagttcaacacaacatgggcgtgggaactggaagaaaagggatac
aaggagatgacgttagagagcaagacagcaatacttaaatatttgtgtgagtgtcagttt
gatgaaaatgtcaagttcaaaaccgccatcaacgaggaggacccagataaaatgcggctg
cagccgatcggccgagacaaagacggtcagatgtactggtttcagctggaccaggaggac
aacgtgcgcgtttacattgaggagcaggacgactcggacgggtcctcgtggaaatgcatc
gtcagagaacgaaacgacttggccgaggttgtggctctgctgaagacgcagatcgacccc
gagctgttgagaagggacgagttaaaaaaggaaaacaatcccgatggtgaaggggacaaa
aaaggtgaagctaaaaagtctgacagctcatcagatgaagaccacaaagaccccaacaaa
gctgcgtgcccggtttcaccaaagacagagaacaatgagaaagaaacgcagaaagaaaac
ttgaaatcagaagcttctgaggtcaaatctctcaatggcatcatcgaaagcaaaagtgaa
gcagaacttctttcagaaaacatcggtacaaaagcccagagcatcaaagaagagccgatg
gaggtgacggacattaaaacagcgacgtgtgaaccggcctctgtaacgtcatgtttatca
gtgaaggcagaaaagggagaggaggtgaagaggaacagcgctgaggagattcaacaggcc
ctgaagaacgaccagcaggccaaaatccccctgaagaaaagaggaatgaagtttagtgaa
gactttgagaaaaccaccgctaacacggtgcaaacgcagtttgtgtcgcaggtcagagac
gctcctaaagaagactgtggtcctaaagaagacgctgctcctaaagaagacgctggtcct
aaagaagacgctggtcctaaagaagacgctggtcccaaaggcgacgctggtcccaaaggc
gacgctgctcctaaagaagacgctggtcctaaaggcgacgctgctcccaaaggcgacgct
gctcctaaaggcgacgctcctcctaaagaagacgctggtcctaaagaagacgctggtcct
aaaggtgacgctgctcccaaaggcgacgctgctcctaaaggcgacgctcctcctaaaggc
gacactcctcctaaaggcgatgctggtcctaaagaagacgctggtcctaaaggtgacgct
gctcccaaaggcgacgctgctcccaaaggcgacactgctcccaaaggcgacgctgctccc
aaaggcgacactgctcccaaaggcgacgctggtcccaaaggcgacgctcttcctaaaggc
gacgctcttcctaaaggcgacgctgctcccaaaggcgacgctgctcccaaaggcgaagct
ggtcttaaaggcgacgctgctcccaaaggcgaagctggtcttaaaggcgacgctgctcct
aaaggcgacgctgctcctaaaggcgacgctgctcctaaaggcgacactggtcttaaaggc
gacgctgctccaaaggcgacgctgctcctaaaggcgacactgttggagaaggaactccag
agtctgagcgagacgctaaaagatgtcgctgccgccaacaaagaacagacgactgaacct
tctgtggttaaatctgtagaagcgagagaaaatgactcgaagtccacagagaaggaggcg
aaggataaaaaagatgaagccggcagtgcaaaggttacggaggaggtcgcatcgcaccag
gagaactcggataagaaaaatctagaaaaggaaaacgacgcagcaacggaaaagaaagaa
gcacacgagtcgcctcctccaccaaaaggagaatcaccacctctacctaaagatggaagt
aatgcaccggaggagtcgtctaatcacgaagactgtgagaaaacgaaagagagcccggcc
gatacagaagagtcttctgctgcatcattaaaggaaactgataaaacattaacaaccgct
gagtcagagaaactaaatttaaatcatgaagccacgtccaaagacccagaatcaaaagat
tcacaggagaaaccagcctgtgcagatgcatcagagtcgagtcagactaaagaaacagac
gaaacagagacatcaaacagaacagaaaacatgaagcgaaccgtgagtgataaagaatcc
gaaacatctgagactaacacagagaaatcagacaaattggcaacaaaagcgacgccagga
gtcattaaaacaacagagacgcaggctgccggcaaagatcctccaaaggaacctgaggat
tctgaaaacacagagtcacagtccatcattaaaaagacagaaacggtaaaagacggtaac
gacgcagaggatcaggaaatcacacaaacttctactgtcattaaaaaggtggataaggaa
acagtcagtgagaaatcagaggaaacacccgacgtcaaggagagcgcagagtcttctgtt
atcaaaacggttgaaaaatcagaatcatgcaaactggccgagaagcagccgagtgtaacg
gtcgctgagacgacgccagaggaaaacagtgcagcctcggaaaagctcgacaagacagag
aagccggaggacacaaagaaaactgtcaactgtgaagacaatatgatccatgatgtcacc
aagataagcgactccacgtcagagcccatggaggtcgaggcagcggccgttaaacaggat
ctgacaaatccacgagaagatgacgagacgaagacgaactctgttgaacatgaaacgaaa
gaggaaacgtctgaaggaaaagataaaccatcaagtcctgtcgagaaaactgacgtcgct
ggagaaacggataaaaagcccaacaaagaagaggagaaggagcctgaagaaccgtcgaag
ccaatggagacagagcagccgtcgtcagaaactaaaacggattctgacaagggaagtgaa
aaagacgcagacagtgaaaagctcacaaacgaccctgagaaaatcctcagtcaagagaaa
gaaagtaaagaggattctacgatagataaaacctcagaaaccgataaaaattctgaaagc
aaagaagctgaggccgaatcctcgactggaactgaaaagccggctcatccgagcaaagaa
ccgccaaccgataaacccgaagacgaggaaagcaaaagcgaagaggaggattcaaacact
aaaaaagaggtggcgaacggcagcgaggctccggctggcgttcgggaggcagctattcgc
cgaaaacgcaagcgcccggcccaccgacggaaagttgtggtgaagagagtggagaggcaa
ggggactcggagtccgacaccaacacggggagatctctgcgaaggtcgccgaggatctcc
aggccgacgccgaaggtggtggagatccacgacaggaagttggagaaatcgcaggcgact
ccgccaacagagaaagaagaggacgacaaggcagagaaagagaaggacgaggaagaggag
gaagaggaagatgcggtgaaggtcgtccagaggaaaccgagagagaaaaaggtggatcag
gagggtcagcccaaaccaaaggggagaaagagacggaaggtttgctggtcgaacactcga
acgcgccgcaaaaagaaaacctctgaagacgaggaggacaacagcgaagaggcatccagc
gaggaggacagcggggatgtggacgacagcgacgaagactacaaggtggagcggagcaaa
aggaggcggaaccgaaaccgagagagacggagctcggcctcctccacgtcctcggacgac
gacctacctccgaacgacgacccctgcaaacactgtggtcttccaaatcaacccgagctg
atcttgctgtgtgactcgtgcgacagcggctaccacacagcgtgtctcaggcctccgctc
atgatcatccccgacggagaatggttctgttctccctgtcaacataagctgctctgtgaa
aagctagaggaacagcttcaaaacctcgacgcctctttgaagaagaaggaacgagcggag
agacggaaagagcgtcttatttacgttggaatcagtgttgaaaacatcatcacaccctca
gtggaggcggaggaggagaagccggagatcgtgatcaaagagaagaaagaagtgaagagg
agtaagagctggggtcggaggtcaacgaggacaaagaaaaatatcagctacagatttgat
gaattcgacgaggcgatcgaggaggcaatcgaggaagacatcaaagaagccgagggtgga
ggagctggtcgaggtaaagacatggccaacatcacaggaggccacagaggaaaggacatg
tccgtcatccttcaagcggatgaggagaacaaggagaacggccgcccaccaccaatcagc
tccgctcagcgcaagagaaagcgccggcgactcaatgacctggacagcgacagcaccgtg
gacgaggaggaaagcgaggaagagtttcgcataagtgaaagctcagaagaagaatttgtc
gtatcggagaacgagtcggatgcagaaaatgactccaacaacagcgactttggcagcaac
ggcagcggcaggcgtcacacttcctcacggaagaggaagccaccgaaacgacgacggagc
tcccgaaagcggcggagaccgaaagggtactcagacgatgaagaggaggagacggatgag
gacgaggacgatgaaatggcgactgaaggctccagcgagttcagcgacagtgatcttgat
atgagccgacggcggtctcggcggagtcagaagaagcaggtgaactactgtgagacatcg
gagtctgacggatctcgggccgaaaacaaacgggtgacaaaaaaacccggacctccccgg
gacagttcagagagtgaagctagttcctccagagactctgaagaggagccgagtgagagg
agggtgaagaggagggccgactcctcggaggaagactcacggcagcgtcacagacgtctt
gcactgaaacgcaggagagcatctgaagacgactcgtcggacgactcatcagacgactca
tcggaggaggatcgtcccgtccgcaaacgggtgaaccgcatcgattcggacgatgacgac
gaggaggaagaggaggagaaaccaaaggagaagaaacctgaggaggagaagaaacctgag
gaggaatcaaagggaacaaatccatcggactgcaacgcggtggagctgccacccaccaac
ggacagagcccggtaaagaacgtcgagggcgtcataagccgacccgctgctccaggcacc
gtccacaaacaggagccgcccaaaaccatcagcgcagcgccggccactgccatcgcaccg
aacggcgtggctggccaggagatggcagcgcaggaggatgacgaagacgacctgttagga
gtcacagacctagtggactacgtctgcaataacgaacaattgtaa
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integrated database retrieval system
