Hippoglossus hippoglossus (Atlantic halibut): 117774889
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Entry
117774889 CDS
T07778
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117774889
04082 Neuroactive ligand signaling
117774889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117774889
Ion channels [BR:
hhip04040
]
Ligand-gated channels
GABA-A
117774889
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117774889
NCBI-ProteinID:
XP_034463472
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Position
14:complement(13386472..13408384)
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AA seq
472 aa
AA seq
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MRVALLGLRLMCLAWLWPITQLHGSHFPNKRRHKDVYVGENTKQKHGGRVDPKMKKLDST
KSLLIKSEQLLRIEDHDFAMRPGFGGSAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYW
QDDRLAFPSSSNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILY
SVRITVTALCSMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTEEIVLSQFF
VEDFQPSFGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRA
VPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFT
TVEEMKKLRRAKMPSSFNATQAMAFDGCFHDNDIDLTPFSEVSSTPNTERNTQARNSAVS
APTEGTRLRRKHPLLQNLSFIMSNSYMIDSYSRVIFPLAYLLFNIIYWSLYA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagagtggccctcctgggcctcagactgatgtgcttggcctggttgtggcccatcacc
cagctccacggcagccacttcccgaacaagaggagacacaaggatgtgtacgtcggagag
aacaccaaacagaagcatggagggcgggtggatcctaagatgaaaaagctggacagcacc
aagtctctgcttattaaatctgagcagctgcttcggattgaagaccatgactttgcaatg
cggccgggcttcggaggttcagctattcctgtcggcatcgacgtccaggtagagagcatt
gacagcatatcggaagtaaacatggactttactatgactttgtacttgaggcattattgg
caggacgaccggctggcctttccttccagcagcaacaagagtcgtaccttcgatgcacgt
ctcgtgaagaaaatttgggttcctgacgttttctttgttcactctaaacgctcgttcatc
cacgatacaaccatggagaatatcatgctgagggtttttcctgacggcaacatcctctac
agtgtcaggatcactgtgacggcactttgctcgatggacttcagtagtttccctctggac
acacagaattgctctctggagctggagagctatgcttacaatgagaacgacctcatgctc
tactggaagaacgggaacgattcattaaggactgaagagatcgtgctctctcagtttttt
gttgaagacttccagccttcctttgggcttgccttctacagcagtactggttggtacaat
cggctctacataaacttcattctcaggaggcatatcttcttcttcatgcttcagacgtac
ttccccaccatgctgatggtgatgctgtcctgggtgtccttctggatagacaggagggcg
gtacctgctcgtgtctctcttggcatcaccacagttctgaccatgtccaccatcatcact
ggtgtctcagcctctatgccacaggtgtcttacgtcaaagccgtggacatctacttgtgg
gcaagcttcctgttcgtcttcctgtccgtcatcgagtacgctgccgtcaactatttcaca
acagtcgaggagatgaagaagctcagacgggcaaagatgccctcgtctttcaatgccaca
caggcaatggcgtttgacggctgtttccatgacaacgacattgacctgactcctttctcg
gaggtgtccagcacaccgaacacagagaggaacacccaggcgcgaaactccgccgtctct
gcgccaacggagggcaccaggctacgccgcaagcaccctttactacaaaatctcagcttc
ataatgagcaacagctacatgatcgactcttactccagagtcatatttcccctggcttac
ctgctcttcaacatcatttactggagtctatatgcatag
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