Hippoglossus hippoglossus (Atlantic halibut): 117774930
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Entry
117774930 CDS
T07778
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117774930 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117774930 (pds5b)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117774930 (pds5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
INTS7_N
Motif
Other DBs
NCBI-GeneID:
117774930
NCBI-ProteinID:
XP_034463543
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All DBs
Position
14:6861445..6887514
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AA seq
1420 aa
AA seq
DB search
MAHSKARAADGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTFPEKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPHNLETSERMKCLYYL
YATLDTNAVKALNEMWKCQNLLRHNVKDLLDLVKKPKSEASSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLEDDERIRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKMEESFPHIKSVLLPVLQAKAKR
GPPRQAKYAIHCINAMFTNRDTHFAQIFEPLHKSLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVPDDEVSTETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFSQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAALSDKLFSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQAATDAKTNEKLYTVCDVAMNIVMSKS
TTYSLESPKDPVLPSRYFTKPDKNFSNTKNFLPPEMKAFFTPGKPKSANVLGAVNKPLAS
AGKPIQSKASRMETASNDDSSSNPGSPQRSKARLESTEMDQSENEDFSLKRADSTDKDIE
KPRGRKRVVASSEDQDSKPKRGRKKAVANTTPAAETEEQWDEDNRPEDEQNSPPKKGRRG
RPPKSAAATQDTPAKGKRGRKKAAPPPEDEEEEEEEEEDKDKGEDKDKDKDKGEEEAEEE
EEEEDKSSENVEVKTKAGRQTRTPRRSQGSESTESTPQKRRGRPPKSAQPPAKKPARGGR
SKAAAAKEDSEEEDEEEEEEEEQEEAPTPKGRKKAAGRRR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccgcagacgggaaggtgacctaccccccgggggtcaag
gagatatctgacaaaatctccaaggaggaaatggtccgcaggctcaagatggttgtgaag
accttcatggacatggaccaggactctgaggaggagaaggagctgtacctgaacctggcc
ctccacctggcatcagacttcttcctcaaacacccagacaaggacgttcgtctgctggtg
gcctgctgtctcgcggacatattcaggatttacgccccggaggcaccctacaccttccca
gaaaaacttaaggacattttcatgttcatcaccagacagctcaaaggactggaggacacc
aagagcgcccagttcaacagatacttctacctgctcgagaacatagcatgggtgaagtcc
tacaatatttgctttgagctcgaagacagcaatgagatattcacccagctttacagaacc
ctcttccaggtcatcaacaatggccacaaccagaaggtgcacatgcatatggtggacctg
atgagctccatcatctgcgagggagacactgtatcacaggagctgttggacacagtgttg
gtcaacctggtgccagcacacaagaatttgaacaaacaagcttatgacctggccaaagct
ttgctgaagaggactgctcaggccattgagccttacatcactaatttcttcaaccaggtg
ctgatgctggggaagacctcggtcagtgatctgtctgagcatgtttttgacctcatcttg
gagctttacaacatcgacagccacctgctgctctctgtgctgcctcagctagagtttaaa
ctcaagagtaatgataatgacgagaggctgcaggtggtgaagctgctggctaagatgttt
ggagccaaggactctgagttggctgcgcagaacaaaccactctggcagtgttacctgggc
aggtttaatgacatccatgtgcctatcagactggagtgtgttaagtttgccagtcactgt
ctcatgaaccacccggacctggccaaggacctcacagaatacttgagggtcagatcacat
gacccagaggaggccattcgccatgatgtcatcgtctctatagtaaccgctgccaagaaa
gacttgtctctagtcaatgatgcattgctcaattttgtaaaggagaggaccctggacaaa
agatggcgtgtacgtaaggaagccatgatgggtctggcatcgatctacaggaagtactca
ctgcagggagaaggaggcagggaggcctctaaacagatatcttggatcaaagacaagctt
cttcacatctactaccagaacagcattgatgacaggttactggtggagcgcgtcttcgcc
cagtacatggttcctcacaacctggaaacctcagagaggatgaagtgtctttattacctg
tatgccaccctggacactaatgctgtcaaagctctgaatgagatgtggaagtgccagaat
ctgctgagacataacgtcaaagacctgctggacttggttaaaaaacccaagtctgaagca
tccagcaaagctgtatttgccaaagtcatggtgatcacaaggaacctgccggacccgggt
aaggcccaggactttgtgaagaagctggctcaggtcctggaagatgacgagcggatcaga
gatcagttggaaaccttagtcagtcccagctgctcctgcaagcaagccgaagtttgtgtg
agagacatcactaaaaagcttggcagccccaaacaacccagcaatccattcctggaaatg
gtcaagttcctgctggagaggattgcccctgtacacatcgacacagaatccatcagtgct
ttgataaaacaagtgaacaaatcgatagatggaacagcggatgacgaggaggagggcgtt
cccactgaagaggccatcagagcaggactggaactattgaaggtgctgtcgttcacacac
ccggtgtcgttccactcagcggagacgttcgagtccctgctgggatgtctgaagatggac
gatgagaaggtggccgaggccgcgctgcagatcttcaagaacaccggcagcaagatggaa
gagagtttccctcacatcaaatctgttttactgccggtactgcaggccaaagccaagagg
ggcccccctcgccaggcgaagtatgccatccactgcatcaacgccatgttcaccaacaga
gacacacacttcgcccaaatctttgagcctcttcacaaaagtctggaccctgcaaacctg
gagcagctcatcacgcctctgaccaccctgggtcacctcgctcagctggccccagaacag
ttcgccgcgccgctcaaatctctcgttgccaatttcatcgtaaaggatctgctcatgaac
gacaggattccaggcaaaaagacgaccaaactttgggttcctgatgatgaagtatctacg
gagactctggccaagatccagggaataaagctgatggtgaggtggctgctgggagtgaag
aacaaccagagcaaatcaggcaactccaccttgaggatgttaactgctattctccacagt
gacggagacctgactgagcaaggcaggatgggtaaaccagatatgtcgaggctgcggctg
gcagcggcgtgcgccctgctgaagctggcacaggagccctgctaccacgaaatcatcaca
ctggagcaatatcagctgtgtgctctcgtcatcaatgatgagtgctaccaggtgcggcag
tgtttttcccagaagctccatcgtggcctgtgccgcctccggctgcctctggaatacatg
gccgtgttcgctctgtgtgcgaaggaccccgttaaagagaggcgggctcatgctcgccag
tgcctggtgaaaaacgtcaacattcgccgagagtatctcaaacagcatgcggcactcagc
gacaagctgttctctctgctgccggagtacgtggtgccctacaccatccacctgctggca
cacgacccagactacgtcaaagtacaagacatcgagcagctcaaagaaattaaagaagct
ctgtggtttgtgctggagatcatcatggccaagaatgagaacaacagccacgccttcatc
aggaaaatggtagaaaacatcaaacagacgaaagacgcccaggccgccaccgatgccaaa
accaacgagaagctctacacagtgtgtgacgtagccatgaacattgtcatgtcgaagagc
accacctacagcctggagtctccgaaagatccggtgctgccctcacgctatttcaccaaa
cccgacaagaatttcagcaacacaaaaaactttctcccaccagagatgaaggcattcttc
acaccaggaaagcccaagtctgcaaacgttctgggggcagttaacaagccgctagcgtca
gcagggaaaccgatccagagtaaagcttctcgcatggagaccgccagcaacgacgactcc
tcgtcaaaccccggttccccacaacgcagcaaggccagacttgagagcacagaaatggat
caaagtgaaaacgaggacttcagcctaaaaagagctgacagcaccgacaaggatattgaa
aagccccggggtcgcaagcgtgtcgtggcctccagtgaggaccaggacagcaagccgaaa
cgtgggcgcaagaaggcggtagccaacacgaccccggctgccgagacggaggagcagtgg
gacgaagacaatcggccggaggatgaacagaacagcccgccgaaaaaaggacgcaggggc
cggcctccgaaatccgccgctgccactcaggacacacccgcaaaggggaagagggggcga
aagaaggcagctcctccaccagaggatgaagaagaggaggaggaggaggaagaggacaag
gacaagggcgaggacaaggacaaggacaaggacaagggcgaggaggaagcagaggaggag
gaggaggaggaggacaagagcagtgaaaatgtggaggtgaagaccaaagcgggaagacaa
accaggacgccgcggcgatcacaaggctcggagtcaacagagtcgacgccacagaagagg
agaggacgtccgcccaaatcagctcagccgcccgccaagaaaccagctcgtggcggccga
tcgaaggcagctgctgctaaagaagactctgaggaagaggatgaagaagaagaggaggag
gaggagcaggaggaggcgccaacaccgaagggtcgcaagaaggcagcggggcgaagaaga
tga
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