Hippoglossus hippoglossus (Atlantic halibut): 117775032
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Entry
117775032 CDS
T07778
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117775032 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117775032 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117775032 (pdlim1)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117775032
NCBI-ProteinID:
XP_034463671
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All DBs
Position
15:complement(18522422..18530322)
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AA seq
325 aa
AA seq
DB search
MPVRVVMQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAQANLSIGDIILAIAGEHTENM
THLEAQNKIKGCIEEMVLSVDRSETKLWSPLSSEEGKAHPYKMNLASEPREMKHIGSTHN
RSALPFAGFGPKVVTNQYNSPSGLYSSENIENFNSAVDEVKNMATATEPNEPDDKAPSEP
SKASIRPPVAADSEVYKMLQENQESDEPPRQSASFMVLQEILETGDPDKPSGFRSVKAPR
TKIGSSFGNTEKLPTCDKCGSGIVGLVVKLRDKFRHPECYTCTDCNINLKQKGHFFVEEQ
IYCETHARERVTPPEGYDVVTVFPK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccgggtggtgatgcagggtcccgggccctgggggttcaggctggtcggggga
aaggacttcgagcagccgctggctatttcccgggtcaccccagggagtaaagcagcgcaa
gccaacctgtctatcggagacatcatcttggctatcgctggcgagcacacggagaacatg
actcacttggaggctcagaacaagatcaaggggtgcatagaggaaatggtgctctccgta
gacaggtcagaaactaaactgtggtcgccactttcatcggaggaggggaaggcacatcca
tacaagatgaatcttgcatcagagccgcgggagatgaagcacataggctccacccacaac
aggagtgcgctgccgttcgctggttttggcccaaaagttgtgaccaaccagtacaacagc
ccctctggtctttactcttcagagaacatcgagaacttcaactctgcagtggatgaagtg
aagaacatggctacagccactgagcccaacgagcccgacgacaaagctccttcagaaccg
tcaaaggccagcattaggccgcctgtggcagccgattcagaggtctacaagatgctgcag
gagaaccaagagtctgatgaacctcctcggcagtcagcttcgttcatggtgcttcaggag
attctcgagacaggtgaccctgataaaccatccgggttcaggagtgtgaaagcaccaagg
acgaagatcggctcgtcctttgggaatacagagaagttgccaacctgtgacaaatgtgga
tccgggattgtggggttggtggtgaagctgagggacaagttccgtcaccccgagtgctac
acctgcacagactgcaacatcaacctaaaacagaagggacatttctttgtggaggagcag
atttattgtgagacgcacgcacgggagcgggtgactccacccgagggctacgacgtggtc
acagtcttccccaagtag
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