Hippoglossus hippoglossus (Atlantic halibut): 117775055
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Entry
117775055 CDS
T07778
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117775055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117775055
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117775055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117775055
NCBI-ProteinID:
XP_034463719
LinkDB
All DBs
Position
15:14459670..14716056
Genome browser
AA seq
1504 aa
AA seq
DB search
MVLQKPHGAHILWAGLLICCFVEIGTCLEFTGAEGQWARFPVWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLILNGKLSLRFSIFCAEPATVVSDTAVNDSQWHAVTIRRNFK
NTTLMVDNEIKWVEVKSKRRDMTVFSHLFVGGIPPELRSVALTLTSAAVKDQPPFTGWLT
DIKVNNTESVMVNSEGVLRDLCGTANMCLNGGVCSLINNEPACDCSQTGFRGKDCSEEDS
QTEGMAHLMMGDQGKSKGQRGEAWLLRSLLSIQGGKEEYVATFKGSEFFCYDLSLNPIQS
SSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFN
DNDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTA
DLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLARQGDPKMKVHGTVAFKCENVATLDPIT
FETPESYVILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQQGKDSKNPQTLKVDFFA
IEMLDGHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPG
ESEILDLDDNLYLGGLPENKVGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEI
QKAAGVKPSCSKEPPKQCLSNPCQNNGLCREGWNRYVCDCSGTGYLGRSCEREATILSYD
GSKFMKVQLPVVMHTEAEDVSLRFRSQRAYGILIATTSRDSADSLRLELESGRVRLTVNL
DCVRINCTSSKGPETIFAGQNLNDNEWHTVRVYRRGKSLKLTVDDLTPVEGQMAGDHTQL
EFHNIETGIVTEKRFLPMVPSNFIGHLQSLAFNGMAYIDLCKNGDIDYCELNAMIGFKNI
IADPVTFKSRSSYVTLTTLQAYYSMHLFFQFKTTSSDGLILYNSGDGNDFIVVELVKGYL
HYVSDLGNGAHLIKGNSNKPLNDNNWHNVIISRDTNNLHTVKIDTKITTQATSGAKNLDL
KGNLYVGGVAKEMFKELPKLVFAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEG
PSTTCQEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPN
DRPSTRADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVGTDDINIEE
TSKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRVV
DEWLLDKGRQLTIFNSQTTIQIGGWERDRSRSFQGQLSGLYYNGLKVFNMAAEGDSNIKV
QGSVRLVGDSPSSITPQSSTTANRSETSTSIMEITTTTASSRRVKQTTPREPQQTTDDFV
VASAECPSDDEDIDPCEPSSGGLANPTGSAPKGYPGTSEVFRESSSTTGMVVGIVAAAAL
CILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKPVNTAKTSGKNKKNKDK
EYYV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaagccacatggtgcccatatcctatgggccgggctgctcatctgctgc
tttgtagaaataggcacttgtctagaattcacaggtgctgagggacagtgggcaagattt
cccgtgtggaatgcgtgttgcgaaagtgaaatgagcttcaacatgaaaacgaagagttcc
cacgggctgctggtttacttcgacgacgagggattttgtgactttttagaactcctcatc
ctgaacggcaaactcagcctgcgattctcgatcttctgtgccgagcccgcgaccgtcgta
tccgacacagcggtcaacgacagccagtggcacgcggtcacgataaggagaaactttaag
aacacaaccctgatggtggacaacgagataaagtgggtcgaggtgaagtccaaaagacgg
gatatgactgttttcagccatttgtttgttggcggaataccaccggaattacgttctgtg
gcgttgacactgacgtcggctgcggtcaaggatcagccgcctttcactggatggttaacg
gacataaaggtcaacaacacggagtctgtaatggtcaacagtgagggggtcttacgcgac
ctctgcggtacggccaacatgtgcttaaatggaggagtctgcagtttaattaacaatgaa
ccagcttgtgactgctctcagactggcttccggggaaaggactgcagtgaagaagacagc
caaactgaaggtatggcacacctgatgatgggcgaccaaggtaaaagtaaagggcagaga
ggggaagcttggcttctaaggtccctactgagcattcaaggaggaaaagaagagtacgtc
gcaaccttcaaaggatcggagttcttctgctacgacttgtccttgaacccgattcaaagc
agcagtgatgaaatcacattgtcattcaaaaccctgcagaggaacggactgatgctgcac
acgggcaaatccgctgattacgtcaacctggcactgaaaaatggggctgtctctctcgtc
attaatttggggtctggagcctttgaagctcttgtggagccagtcaatgggaaatttaat
gacaatgattggcatgatgtcaaagtaacaaggaatctacgtcagcactcaggcattgga
cacgctatggtaacaatatccgtggatgggattctgaccaccacaggatatacacaagaa
gactacaccatgctaggctctgacgactttttctatgttggagggagtcctagcacagct
gacctgcccggatctccggtcagcaacaacttcatgggctgcctcaaggaggttgtgtac
aaaaacaatgacgtgagactggagctgtccaggctggccaggcagggtgaccccaagatg
aaggtccacggtaccgtggcctttaagtgtgagaacgtggccactctggaccccatcacc
ttcgagacgccagagtcttatgtcatcctcaacaagtggaacgccaagaagacgggctcc
atctcctttgacttccgcaccacagagcccaacggccttctcctcttcagccatggcaag
cccaagcagcaggggaaggattccaagaacccccagactctcaaggtggacttctttgcc
atcgagatgctggacggccatctgtacctgctgctggacatgggctcgggaaccacaaag
accaaggcggtcaacaagaaagtcaatgacggcgaatggtaccatgtggacttccagcga
gatggcagatcaggcaccatttctatcaacaccctccgcactgcctacacagcccctgga
gaaagtgagatcctggacttggatgacaacctctacctcgggggtctgccagagaacaaa
gtggggctggtgttcccaacggaggtgtggacagcgctgctcaactacggctacgtgggc
tgcatccgggatctattcatcgacggccagagtaaggatgtccggcgcctggccgagatc
cagaaggctgccggggtgaaaccctcgtgctcgaaggagcctcctaagcagtgtttgagc
aacccctgccaaaacaatgggctctgtagagagggctggaaccgctacgtgtgtgactgc
tccggaactggatacctgggacgctcctgtgaaagagaggcgacgatcctcagctatgac
ggcagcaagtttatgaaggtccagctgccagtggtgatgcacacagaagccgaggacgtg
tccctgcgcttccgctcccagcgagcctacggcatcctaatagccaccacgtctcgggac
tcggctgacagcctgcgtctcgagctggagagcgggcgcgtccgcctgactgtcaatcta
gattgtgtcaggattaactgtacctccagcaaaggtccagagactatatttgcgggtcag
aatctgaacgataatgagtggcacacggtgcgtgtgtacaggcggggcaagagtttgaaa
ctgaccgtagacgatctgacgcctgtagaaggtcaaatggcgggcgatcacacccaactg
gagttccataacatagagacgggcattgtgacagagaagcgcttcttgcccatggtgccg
tccaacttcatcggccacctccagagcctcgccttcaacggcatggcctacatagacctc
tgcaaaaacggcgacatcgactactgcgagctcaacgccatgatcggcttcaagaacatc
atcgccgaccccgtcaccttcaagtcgcgctccagctacgtgaccctcaccacgctgcag
gcctactactccatgcacctcttctttcagttcaagaccacgtcctcggacggcctcatc
ctgtacaacagcggggatgggaatgacttcatcgtggtggagctggtcaaaggttatctg
cactatgtgtctgacctggggaacggagcccacttgattaaaggcaactccaacaagccc
ctgaacgacaacaactggcacaacgtcatcatctccagggacacaaacaaccttcacact
gtgaagatcgataccaagatcaccacgcaggcaacctcaggagccaagaacctggacctg
aagggcaacctttacgttggtggggtggcgaaggagatgttcaaggagctgcccaagctg
gtgttcgccaaggagggtttccaaggttgtctggcgtcggtggatctgaacgggcggctc
ccagacctgatgtcggacgctctggactgcgtgggtcagatagagcgagggtgtgaaggc
cccagcacgacgtgccaggaggactcgtgtgccaaccagggcgtgtgcctgcagcagtgg
gagggcttcagctgcgactgcagcatgaccacgttcggagggccgttgtgcaatgacgcg
ggaacaacgtacatattcgggcgagatggtggactgatcacatacacgtggccgccaaat
gaccgtcccagcacgagggcggaccggctagccatcggtttcagcacgcacctgaaggat
gctgtcctggtgagggtggacagctcctctggtctcggagacttcttgaagctccacatc
gaaaaaggaaacattgctgttgtatttaatgtcggaacagacgacattaacattgaggag
acatcaaagtttgtaaatgacggaaagtaccatatagtgaagtttacgaggagtgggggt
aatgccactctgcaggtggatgacctgccagtcattgagcgctaccccacaggcaacaat
gataacgaacgcctggcgattgctagacagcgaatcccataccgacttggtcgagtagtt
gacgaatggctactcgacaaagggcggcagcttacaatcttcaacagccaaaccactata
cagattgggggctgggagcgagaccggagtcgatcgtttcagggccagctctcgggcctc
tactataatggcttgaaggtgttcaacatggccgccgagggggattctaacattaaggtc
cagggcagcgtgcggcttgtgggggactcgccctcctccatcacgccgcagtcgagcacc
acggccaaccgctcggagacgtccacgtccatcatggagatcaccaccaccacggcgtcc
agcaggcgtgtcaagcagacgacgccacgagagcctcagcagacaaccgacgactttgtg
gtggcgtcggccgagtgtccgagcgacgacgaggacattgatccctgtgagccgagctca
ggtgggttagccaatcccacgggttccgcaccgaagggttacccgggcacatcggaggtc
ttcagggagtccagcagcacgacggggatggtggtcggcatcgtggcggcggcggcgctg
tgcattctcatcctgctctacgccatgtataaataccggaacagagatgaaggctcgtac
cacgtggacgagagtcgcaactacatcagtaactcggcgcagtccaacggcaccgtggtc
aaagagaaaccagtcaacactgcaaagacctcgggcaagaataagaagaacaaggacaag
gagtactacgtgtga
DBGET
integrated database retrieval system
