Hippoglossus hippoglossus (Atlantic halibut): 117775077
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Entry
117775077 CDS
T07778
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117775077 (hps1)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
117775077 (hps1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
117775077
NCBI-ProteinID:
XP_034463799
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Position
15:11913408..11922364
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AA seq
680 aa
AA seq
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MKCLLIASESAEVLFHWTDPEFQQNIQQQYGESQEEGQGLPAFEDSISTLFAPIIISCST
MVDRLGDNYTSFTTENNHIYVLHQFDECLYIAVNGDGEEGEDALRRKIYVMKKMVEVMFG
MVTLSTQLLRRELRPQDTEQRARLWKHLQSLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSAERAGEEVLHAFILVHTKLLAFYSSRNASTLATSDLLAIIIMV
QNMYPSNEDLDDPGPEDVESTSGSGHESFYTPEPSPTDRDSSSSDKAERESLPMFEFMDP
DIQMAEDSLKALEVPPPDPSTPRRVFLEISGKEGLYPMMPHSMYCLPLWPGITLVLLTKI
PTNAVAMSVYKFLEAFAKLEKCLNEGQEGSSSTRGQLAINDIRSKLDKFIKALGPSELQS
AQLLNVWTEFKNRAYARGGPGFNKDLIPWCKHMKTQLCGIYRQCFLIEPGPGDIPQRLSQ
GLQERAQTMAQEKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSLS
ITERTTSELGKGPVAQFIKNKVWNLVSTTRRFLRKGYSTVTLRDGDFYFCYFLWFENETG
YKLEAGDIPILPDDSAPIGMLAWDYYRKLLRYYNKNHQVEGVRCYELLTVHLGVIPTEII
LQHCRQLASKLWEPSRNPLL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcctgctgatagccagtgaaagcgccgaggtcctcttccactggactgaccca
gagtttcagcagaacatccagcagcagtatggggagtctcaagaggagggccaggggctt
cctgcctttgaggacagcatcagcactctgttcgctcccatcatcatctcctgcagcacc
atggtggacaggctcggtgacaactacacctccttcaccacggaaaacaaccacatctac
gtcctacaccagttcgacgagtgtctctacattgctgtgaatggagacggcgaggaggga
gaggacgctctgaggaggaagatctatgtgatgaagaaaatggtcgaggtcatgtttggc
atggtcaccctcagcacccagctcctcagaagagaactgcgacctcaggacacggagcag
agagcgaggctgtggaagcatctccagagtctgctggagacctacagccacctccgagag
aacgaccagagcttcttagtggaggcagtggagaggctgatccaccccacgctgtgcgag
cagtgcatcgagttcctggagcggcgtttagttcagcagctcaacagcagcgcggagaga
gcgggagaggaggtgctgcacgccttcatcttagttcacaccaaactgctggctttctac
tccagccgcaatgcgagcacactggccacctccgacctcctggccatcatcatcatggta
cagaatatgtatcctagcaacgaagacttggatgacccgggtcctgaggatgtggagagt
acgtcgggttctggtcatgagagtttttacacccccgagccgtcgcctacagacagagac
tccagcagctcagacaaggccgagagagaaagtctccctatgtttgagttcatggaccca
gacatccagatggcagaggacagcttgaaggctctggaggttcctcctcccgacccttca
acccctcgcagagtctttttagagatctcaggcaaagagggtctatatcccatgatgcct
cactccatgtactgtctgccactgtggcccggcatcacgctagtgctgctaacgaagatt
cccaccaatgcagtcgccatgtcggtgtataagtttttggaggcttttgccaaactggag
aagtgtttaaatgaaggacaagaaggttcctcttcgactcgaggacaactggcgataaac
gacatccgcagcaaactggataaattcattaaagccctggggcccagtgagttacagtct
gctcagttactaaatgtctggacggagttcaagaatcgagcctatgccagaggaggacct
gggttcaacaaagatctcatcccgtggtgtaagcacatgaagacgcagctctgtggtata
taccgacagtgtttcctcattgaaccaggaccaggcgacattcctcaacgtctctcccag
ggtctgcaggagcgagcgcagaccatggcgcaagagaaactcatggactggaaggacttt
ctgttggtgaaaagcaagaggaatatcaccatggtttcttacctggaggatttcccaggc
ctcatccatttcatctgtgtggaccggtccaccggccaaatgatcgcaccgtcactcagc
atcacagaacgcaccacgtctgagctggggaaggggccggtggctcagttcattaaaaac
aaggtttggaacctggtcagcacgacgcgccgctttctccggaagggttactccactgtc
acgttgcgtgatggagacttctacttctgctacttcctctggtttgaaaatgaaacgggc
tacaagttagaggccggggacatacccatcctacccgatgactctgccccaatcgggatg
ctggcctgggactactacaggaagctgctgcggtactacaacaagaatcaccaggttgag
ggggtgaggtgctacgagctgctgaccgtccacctgggggtcatccccaccgagatcatc
ctccagcactgccgacagctggcgagcaaactgtgggagccttcacgcaatcccttgctg
tag
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