Hippoglossus hippoglossus (Atlantic halibut): 117775094
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Entry
117775094 CDS
T07778
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117775094 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117775094 (gbf1)
Membrane trafficking [BR:
hhip04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117775094 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
117775094
NCBI-ProteinID:
XP_034463827
LinkDB
All DBs
Position
15:complement(23270080..23354318)
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AA seq
1882 aa
AA seq
DB search
MVDKNIYIVQGEIGTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILNSITELSDIE
PNIFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSDLLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYIGANMKKAYNILWKNKRVQLKMRAGGMSESSKWK
KQKRSPRPPRHMVRSPSGQMDPAQSSTLSNNNLSGGVPFIEQGLSASSLPASDSAGSSIS
SPTTTDSGLDTCSKATSREDLSDLEQCSLSANTLGPEPSSPDAHSEGSQVEPSQSASVES
IPEVLEDKDSITEQSDSTSVHDMDYVNPRGVRFTQSTQRDGASLIPYGLPCLRELFRFLI
SLTNPHDRHNTDAMMHMGLQLLTAALESAHIANYQSLLGLVKDELCRHLFQLLSADRMNL
YASSIRVCFLLFESMRLHLKFQLEMYLKKMMDIITSENVKMPYEMREMALEALVQLWRIP
SFVTELYINYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEANC
QAKVLNNTAQQEQSETLLAEGEGSSNSGPDTTTDLNRLGSTNGLSLPQAPSAPICPPTSG
HLMAEEMKLGRQDQGDNDAAAEKRAPKKPQRFSSCLPDSQELMEIRTKKKLLITGTEQFN
QKPKKGIQFLQEKGLLSSPMDNNQVAQWLRENPRLDKKMIGEFISDRKNMDLLDSFVNTF
TFQGLRIDEALRLYLEAFRLPGEAPVIHRLMETFTDNWHKVNGSPFMSNDAGFSLAYAVI
MLNTDQHNNNVRKQNIPMTVEQYKKNLKGVNGDKDFDQDMLEDIYNAIKNEEIVMPDEQT
GLVKENYVWSVLLHRGATPEGYFLHLPPGSYDHDLFTMTWGPTIAALSYVFDKSLDDSII
QKAITGFRKCAMIAAHYGFSDVFDNLIISLCKFTTLSNESVENLPTVFGSNSKAQTAAKT
VFDLAHRHGNILREGWKNIMDSMLQLFRAELLPKAMVEVEDFLEPNGKISLQREETPSNR
GESAVLSFVNWLTLSGAEQSGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESL
QELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVWQTVRDHLCHLCVHANE
SCFLVERAVVGLLRLAIRLLRREDISSQVLHSLRLLLMMKPHVLSRVSREVAYGLHELLK
TNAANIHCTDDWYTLFSLLECIGAGVKPPASFQLSSTTTDNDTGAQSDSELTSHHPSEVS
LDRGYTSDSEIYTEHSKTRISRSTTDVDVASSGWLVVGKDDLDLSKTPPLSTKAQLNHPL
VNQYSLTLGQDLGQHDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGG
YRNHDKKKSHKYGSRSRLMKKAGGREKEGAGGTRRGGSRASSQRPSRSHSDEEEDEGVPA
SYHTVSLQVSQDLLDLMHTLHTRAASIYSSWAEEQRHLQAAGRKIEADSQTLWTSCWCPL
LQGIAWLCCDARRQVRMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNIS
PADVGGMEETRMRGCTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDRYMHAGSSDLLLE
AIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWERIICFLPNLREELFKQTVIPEPV
PSPPGEPVQPPPPAGQPPSPQMSLPPAQPPSPVPVSPAETQTPSRPASPKEPQSTSATGA
DRSSAVSPSNPPMPVPLTTSPTQNPSPLSQSPLILQPLASPLQVGVPPMSLPIILNPALI
EASSPLPLLTSPRPLSMADEVK
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatctacatcgtccagggagaaattggcactgttgttggagctatc
aagaggaactccagatggaatactcatactcccctggatgaagaacaggacccgttactc
aacagctttggacacctcaaagaaatcctcaacagcattacagagctgtcagatattgaa
cccaacatattcctgaggcctttcctggaagtggtccgctctgaggacaccactggacca
atcacaggacttgcccttacctctgtcaacaagttcctttcctacggcctcatcgatgca
aaccatgaagcggcagcagaggccattgagaacatggcagatgccgtcacacatgctaga
tttgtgggaacggaccctgccagtgatgaagtcgtcctcatgaaaattctacaggtcctg
aggactctgctgctgacgccagtcggagcccatctgaccaatgagtcggtttgtgagatc
atgcagtcctgcttcaggatttgctttgaaatgcgccttagtgaccttctcaggaaatca
gctgaacatacactggttgacatggtgcagctacttttctccagactcccacagttcaaa
gaagaggccaagagttatattggtgccaacatgaagaaggcttacaatatcttgtggaaa
aacaaacgagtgcagttgaagatgcgtgccggtggaatgagtgagtcgtccaaatggaag
aagcagaagcgctcgccgaggccgcctcgacacatggtccgaagtccctctggtcagatg
gacccagcccagtccagcaccctcagcaacaacaacctttcaggtggcgtcccgttcatt
gagcagggcctgtctgcctctagcttaccagcctcagacagtgctggctcatccatttcc
agccctacaaccacagatagtggcctggacacctgctccaaagccacctccagagaagac
ctttctgacctggaacagtgcagcttgtctgcaaacaccctgggccctgagcccagctct
ccagatgcacactcggagggcagtcaagttgaaccatctcagtcggcctcagtggaatct
atccctgaggttctggaggacaaagactccattacagagcagtcggacagtacctctgtc
catgatatggactatgtcaacccccgaggagtccgtttcacacagtccacacaaagagat
ggagcatctctcatcccttatggcctcccatgtctaagggagctttttcgcttcctgatc
tcactgaccaacccccatgaccgccacaacactgacgcaatgatgcacatgggcctgcag
ctgctgactgctgcacttgagtcagcacacattgctaactaccagtcgttactaggacta
gtcaaagatgagctctgcagacatctcttccagttgctgagtgctgaccgtatgaacctg
tacgcttcctccatacgagtttgcttcttgcttttcgaaagcatgaggttacatctcaag
tttcagctcgagatgtacctaaagaaaatgatggacatcatcacatcagagaacgttaag
atgccatatgagatgagggagatggctctggaggctctggtgcagctgtggaggatcccc
agctttgtcaccgagctgtacattaactatgactgtgacttttactgctccaatctgttt
gaagacctcactaaactgctgtccaagaatgcgttcccagtgtcagggcagctttacaca
acgcacctcctgtcgctggaggctctcctcacggtgattgacagcactgaggctaactgt
caggccaaagtgctcaacaacactgctcaacaagagcagtcagaaacactgctggcagag
ggagaaggttcaagcaatagtggaccagacactacaactgatcttaacagacttggcagt
accaatggtttgagtcttccacaagctccgagtgcaccaatatgtccaccaaccagtggt
catctgatggcagaggagatgaaactgggcagacaggaccaaggagacaatgatgctgca
gctgagaagagagcaccgaagaagcctcagcgtttctcatcatgtttacccgattcccaa
gaattgatggaaattagaacaaagaaaaagctgctaatcacaggcacagagcagtttaac
cagaagcccaagaagggaatccagttcctgcaggagaaaggcctcctcagtagccccatg
gacaacaaccaggtggcgcagtggctcagagaaaacccccgactggacaaaaagatgatt
ggagagttcatcagtgaccgcaagaacatggacctcctggacagctttgtgaacacgttc
accttccagggacttcgtattgatgaggccctgcgtctctacctggaggcctttagatta
cctggagaggctccagtcatccatagactcatggaaaccttcacagacaactggcataaa
gtgaacggctctccattcatgagcaacgatgcaggcttttccttggcctatgctgtcata
atgttgaacactgaccagcataataacaatgtccgcaagcagaacatccccatgactgta
gagcaatacaagaaaaatcttaagggagtaaatggagacaaagactttgaccaggacatg
ttggaggacatctacaacgctatcaagaatgaagagattgtgatgccagatgagcagaca
ggtttagtgaaggagaactacgtatggagcgtgttgctacaccgcggtgccacacctgag
ggttatttcctccacttgccacctggcagctacgaccatgacttgttcaccatgacctgg
ggtcccaccattgctgccctctcctacgtctttgacaagagcctggacgacagcatcatc
cagaaggccatcactggcttcaggaaatgtgcaatgatcgctgctcactatggcttcagt
gatgtttttgacaatttgatcatctccctgtgcaagttcaccactctgagcaatgagtct
gtggaaaacctcccgacagtgtttggcagcaacagtaaggcgcagacagcagccaagacc
gtgtttgacctcgcccatcggcacggcaacatcctgagggagggttggaagaacatcatg
gactccatgctgcagctgttcagagccgagctgctgcccaaagccatggtcgaggtggag
gatttcctggagccaaacgggaaaatttcacttcagagagaggaaacgccatcaaatcgt
ggtgagtctgcagtgttgagctttgtgaactggctgacgctgagtggagccgagcagtca
ggcctcagaggcccttccacagaaaaccaggaagccaagcaagccgccatcctctgcata
aagcaatgtgacccagaaaagctgatcacagagagtaaattcctacagttggagtcactg
caggagctaatgaaggctctgatatcagtcaccccagatgaagagacctacgatgaagag
gatgctgccttctgcctggagatgttgctgcgtattgttttggagaatcgggaccgggtg
tcctgtgtgtggcagacagtgcgtgaccacctctgccacctctgcgtccacgccaacgag
agctgcttcctagtggagagggccgtggtgggactcctgcgactagcgatccgcctgctc
cgacgagaggacattagctctcaggttctccactccctgcgtctcctgcttatgatgaaa
cctcatgtgttgtcccgggtcagcagggaggtggcgtacggccttcatgagctgctgaag
accaacgcagccaacatccactgcacagacgactggtacacgctcttctccctgctggag
tgcatcggagctggagtgaaacctccggcttccttccagctctcctccaccacaactgac
aacgacacaggagcccagtcagatagcgaactgacctctcatcatcccagtgaagtgagt
ttagaccggggctacacgtctgactctgagatttatactgagcacagcaagaccaggatc
tctcgctccaccactgatgtggatgtagccagcagcggatggctcgtggttgggaaagat
gacctggacttaagtaagacccctcctttgagcaccaaagcccagctaaatcacccactg
gtcaaccagtacagcctgacgctgggtcaagacctgggccagcacgacacaaagtccctc
atcaaatgtgtggaaacgctgtccttcatcgtccgcgatgctgcccacgtcaccccggat
aattttgagctgtgtgtcagagctatacgagtgtttgtggaggccagcctcaatggaggt
taccgcaatcacgacaaaaagaagagccacaagtacggctccaggtcccggctgatgaag
aaggcaggcgggagggaaaaggagggtgcaggcggcacaaggcgcggtggcagccgagca
tccagccagcgtccatcccgttcccacagcgatgaggaggaggacgagggggtcccagcc
agttaccacacggtgtcattacaggttagtcaggaccttttagacctgatgcacacgctg
cacacccgggctgccagcatctacagctcctgggccgaggaacagcgtcacctgcaggcc
gcgggcaggaaaatcgaggccgactcccagactctgtggaccagctgctggtgtccgctg
ctgcaaggtatcgcttggctgtgctgcgatgccaggcgacaggttcgtatgcaggccctc
acctacctccagagggcgctgcttgttcacgatcttcagacactcgatgccactgagtgg
gagtcctgcttcaataaggtgctattccccttgttgactaagctgcttgacaacataagc
ccggcagatgtgggtggtatggaggagaccagaatgagaggttgcactctcctgtcaaag
gttttcctccagcacctgtctcctcttctgtccctgcctacctttgctgccctgtggctc
accatcctggacttcatggacaggtacatgcacgcaggctccagtgacttactgctggag
gccattcctgagtctctgaagaacatgctgctggtgatggacactgcaggaatctttcac
agtgctgactccaggacaggatactccgacctgtgggaaatcacctgggaacgcatcatc
tgcttcctgcctaacctgagggaggagctcttcaaacagactgtcataccagaaccagta
cccagtcctccaggagagccagtgcagcctccacctccagcaggtcagcctccatcccct
cagatgtctctaccacctgcccagccgccctccccagtcccagtgtcccctgcagagaca
cagacccccagcaggccagcatcacccaaggagcctcagtcaaccagtgccaccggagca
gaccgatcatctgcagtctcaccctccaacccccccatgccagtgccgttaactacgtcc
cccacccagaacccctcacccttaagccagtcacccctcatcctgcagccccttgcctct
cccctgcaggtgggagtcccgcccatgtccctgccaatcatcctgaaccccgccctcatc
gaggccagctctcccttaccgttgctgacctcgcccagacccctgagcatggctgacgag
gtcaagtaa
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