Hippoglossus hippoglossus (Atlantic halibut): 117775289
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Entry
117775289 CDS
T07778
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04371
Apelin signaling pathway
hhip04514
Cell adhesion molecules
hhip04520
Adherens junction
hhip05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117775289
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117775289
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117775289
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117775289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117775289
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117775289
04090 CD molecules [BR:
hhip04090
]
117775289
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117775289
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Major cadherins
117775289
CD molecules [BR:
hhip04090
]
Proteins
117775289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
TM_ErbB1
PKD_4
K319L-like_PKD
Y_Y_Y
Big_13
Motif
Other DBs
NCBI-GeneID:
117775289
NCBI-ProteinID:
XP_034464191
LinkDB
All DBs
Position
15:complement(24236663..24256231)
Genome browser
AA seq
979 aa
AA seq
DB search
MATAWLAAVGILFVAFQASALETTEEPKCVPGFKSDVLIFRVTRKHLGPGTRLGRVGFND
CTNRTRFLFISNDRRFMVHPDGILMVGRKVFLHEGHLDFFIHIWNSHGKKMTVPVKVVDH
GHHRGHHQGDNRGHHHVHHQGENHGQHQERTHGHHQQKTHGHYQGKNQGDHHGHPHVHHQ
EKNHGHHQGKIHGHQHGQHQRNVEHHLGENRHHNNQHHLNEVDSANNTENATTPEVPVLK
FPKSGDGLKRRKRDWVIPDINVPENNKGPYPLKVSQIRSSEDKVKTISYSITGPGANEPP
LGLFTMDRLTGTLYLTQPLDREKVDRYTFQAHAAVDGSLNAEQPMDIMVIVIDQNDNKPV
FGQDTFLGEVPESSPTGFEVITVVAIDLDEPGNANSDIRYRILSQDPKFPSGPLFEINPN
TGAIRVNARGLDREKYPKHTLVIEAADMEGNGLTGNAKVIITVTDSNDNPPAFTLSSYEA
TVPENRVDALVITMAVTDGDEPHSPAWNAKFKIVDGDPGGLFTVTTGSNKHEGIITTAKG
LDFEMISKHTLLVAVENDIPFATPLPTATATVVVNVQDVNEAPVFEPVEKFVSKPENLPV
DGDVVQYIASDPDIARKQKVMYKIISDPAGWLNVAKDTGLIKVKSIMDRESHFVKDSKYT
ALIGAYDNDDVPATGTGTLIIQLEDVNDNAPIIEERTIKVCYKESAPQLLSVTDKDGPGF
AAPYSVSLQGMSKTNWTARMNDSKTGIVLNLGTELESGEYTVVLRVTDNDGMEQDNTVQA
TVCDCTGEIVSCSGRIAGGSSLPMILGILGGILLLLMLVLLLLLFARRRGGEKKEPLLQD
DDIRDNIYYYDEEGGGEDDQDYDLSVLHRGLDNRPEVFRNDVMPNFMPAPQYRPRPANPE
EIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSDAGSLSSLNSSSSGDQDYNCLNEWG
PRFKKLADMYGGGEDDDML
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcttggctcgcggctgtgggcattttattcgtcgcttttcaggcctcagct
ttagagaccacagaggagccaaaatgtgtacctggattcaagtcagatgtgttgatcttc
agagtgaccagaaagcacctggggccgggtacaaggctgggcagagtgggcttcaatgac
tgcacaaaccgcacaagatttcttttcatcagtaatgacagacgtttcatggtccatcca
gatgggatattgatggtagggagaaaggtttttcttcatgaaggacaccttgacttcttt
atccatatttggaactcgcatggtaaaaaaatgacagttcctgtcaaggtagtggaccat
ggacatcaccgtgggcatcaccaaggggataaccgcggtcatcaccatgtgcatcaccaa
ggggaaaaccatgggcaacatcaagagagaacccatgggcatcaccaacagaaaacccat
gggcattaccaagggaaaaaccagggagatcaccatgggcatccccatgtgcatcatcaa
gagaaaaaccatgggcatcaccaaggtaaaatccatgggcatcaacatgggcaacaccag
cgaaatgttgagcatcacctcggagagaacagacaccacaacaatcagcaccacttgaat
gaagtggactctgctaacaatacagagaatgcaaccaccccagaggtgcctgttctgaag
ttccccaaatctggtgatggattgaagaggaggaagagagactgggttattcctgacatc
aatgttcctgaaaataacaaaggaccctatcctcttaaagtatctcagatccgttctagt
gaagataaagtgaagacgatatcttacagcatcactggtccaggagctaatgagcctccc
cttggccttttcacaatggacaggctcactggtactttgtatctgacacagcctctggac
agagagaaggtggacaggtacacgtttcaagcacatgctgcggtagatgggtcactaaat
gctgagcagccgatggatattatggtgattgtaatagaccagaatgacaacaaacctgtt
tttggtcaagatacatttctgggagaagttcctgaatcctcaccaacaggttttgaggtg
ataacggttgtggccatagatcttgacgagccgggtaatgccaattcggatattcgttac
cgtattctgagccaggatccaaagttccccagtggcccactgtttgagatcaacccaaac
actggagcaatcagagtcaatgcccgtgggctagacagagagaaatacccaaagcacact
ctggtgatagaggcagcagacatggagggaaacgggttgactggaaatgccaaagtaatc
atcactgtaacagacagcaatgacaaccctccagctttcactctgtcctcttatgaggca
acagtaccagaaaatagagtggacgctctggtcattacgatggcagtaacagatggtgat
gagccacattcaccagcctggaacgccaaattcaagattgttgatggtgatcctggaggc
ctgttcacagtcacaacaggaagtaacaaacacgaagggatcattactactgccaagggt
cttgactttgaaatgatcagcaagcacactctgttggttgcagtggagaatgacattcca
tttgctactccactgcccactgccacagccacagtggtggtgaacgtgcaggatgtcaac
gaagctccagtctttgaaccagttgaaaagtttgtgtccaaaccggagaaccttcctgtt
gacggtgacgtggtgcagtacattgcttctgaccccgacattgcacgcaaacagaaagtc
atgtataaaataatcagcgaccctgcgggctggctgaacgtggccaaggacacaggcctg
attaaggtgaaaagcatcatggacagagagtcgcactttgtcaaggacagcaaatacaca
gcactcattggtgcatacgacaatgatgacgtcccggccacaggaactggtactctgatt
atacagcttgaagacgtcaatgacaatgcacccataattgaggaacgtacaataaaggtg
tgttacaaggaatcggctcctcagctgctttcagtaacagataaagatggacctggcttt
gctgctccatacagtgtctctttacagggcatgtccaagaccaactggaccgctcggatg
aatgattccaaaacgggcatcgtacttaatttaggcactgagctggaaagtggagaatac
actgtggtcctgagggttacagacaacgatggcatggagcaggacaacaccgtccaggcc
acagtgtgtgactgcacaggtgaaatcgtgtcctgttcagggcgaattgccggtgggagc
agcctgcccatgattcttggaatactgggaggcatcctgttgctgctcatgctggtgctg
ctactactgctgtttgcgagacggagaggaggagaaaagaaggagcctcttctgcaggac
gatgatatcagagacaacatctattactatgacgaggagggaggtggagaggacgatcag
gactatgacctgagtgttctccaccgtggtctggacaaccggccagaggtgttcaggaac
gacgtgatgccaaacttcatgccggctcctcagtaccggcctcgccctgccaacccagag
gaaattggcaacttcattgatgataatttgaaggcagccgacaatgaccccacagcgccc
ccctatgattccctgctggtttttgactatgagggcggtggctctgatgcaggaagcctc
tcctcactgaactcgtcgagcagcggagaccaggactacaactgcctgaacgaatgggga
ccccgcttcaagaaactggcagacatgtatggcggaggagaggatgatgatatgctgtaa
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