Hippoglossus hippoglossus (Atlantic halibut): 117775292
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Entry
117775292 CDS
T07778
Name
(RefSeq) cadherin-1-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04371
Apelin signaling pathway
hhip04514
Cell adhesion molecules
hhip04520
Adherens junction
hhip05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117775292
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117775292
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117775292
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117775292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117775292
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117775292
04090 CD molecules [BR:
hhip04090
]
117775292
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117775292
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Major cadherins
117775292
CD molecules [BR:
hhip04090
]
Proteins
117775292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CopC
PKD_4
Cadherin_4
K319L-like_PKD
Big_13
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
117775292
NCBI-ProteinID:
XP_034464195
LinkDB
All DBs
Position
15:complement(24143688..24169076)
Genome browser
AA seq
785 aa
AA seq
DB search
MIYEQMAPTRFMAVGILLIVFQASALETTEEPKCVPGFKSDVLIFRVTRKHLGPGTRLGR
VGFNDCTNRTIFLFISNDRRFMVHPDGILMVKRMVALLEGHQDFFIHSWNLHGQKMTVPV
TVVHYGRLHGQNDGHHHGQHRGENHGHHQQNVEHHLGEHRHHNNQHHLNEVDSANNTENA
TTPEVPVLNFPKSGDGLRRRKRDWVIPDINVPENLRGPYPLKVSQIRSSEDKVKTISYSI
TGPGANEPPLGLFTMDRLTGTLYLTQPLDREKVDRYTFQAHAAVDGSLNAEQPMDIMVIV
IDQNDNKPVFGQDTFLGEVPESSPTGFEVITVVAIDLDEPGNANSDIRYRIVSQDPKFPS
GPLFEINPNTGAIRVNARGLDREKYPKHTLVIEAADMEGNGLTGNAKVIITVTDSNDNPP
AFTLSSYEATVPENRVDALVITMAVTDGDEPHSPAWNAKFKIVDGDPGGLFTVTTGSNKQ
EGIITTAKGLDFEMISKHTLLVAVENDIPFATPLPTATATVVVNVQDVNEAPVFDPVEKF
VSKPENLPVDGDVVQYIASDPDIARKQKVMYKIISDPAGWLNVAKDTGLIKVKSIMDRES
HFVKDSKYTALIGAYDNDDVPATGTGTLIIQLEDVNDNAPIIEERTIKVCYKESAPQLLS
VTDKDGPGFAAPYSVSLQGMSKTNWTARMNDSKTGIVLNLGTELESGEYTVVLRVTDNDG
MEQDNTVQATVCDCTGNVVSCVAGGSSLPMILGILGGILLLLSESLILVQFEKIYIEVLG
KNFSL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgatttatgagcagatggcgcccactcggttcatggctgtgggcattttattaatcgtt
tttcaggcctcagctttagagaccacagaggagccaaaatgtgtacctggattcaagtca
gatgtgttgatcttcagagtgaccagaaagcacctggggccgggtacaaggctgggcaga
gtgggcttcaatgactgcacaaaccgcacaatattccttttcatcagtaatgacagacgt
ttcatggtccatccagatgggatattgatggtaaagagaatggttgctcttctggaagga
caccaggacttctttatccactcctggaacttgcacggtcaaaaaatgactgttccagtc
acagtcgtgcactatgggcgtctccatggacaaaatgatggtcatcaccatggacaacac
agaggggaaaaccatgggcatcaccagcaaaatgttgagcatcacctcggagagcacaga
caccacaacaatcagcaccacttgaatgaagtggactctgctaacaatacagagaatgca
accaccccagaggtgcctgttctgaatttccccaagtctggtgatggattgaggaggagg
aagagagactgggttattcctgacatcaatgttcctgaaaatctcagaggaccctatcct
cttaaagtatctcagatccgttctagtgaagataaagtgaagacgatatcttacagcatc
actggtccaggagctaatgagcctccccttggccttttcacaatggacaggctcactggt
actttgtatctgacacagcctctggacagagagaaggtggacaggtacacgtttcaagca
catgctgcggtagatgggtcactaaatgctgagcagccgatggatattatggtgattgta
atagaccagaatgacaacaaacctgtttttggtcaagatacatttctgggagaagttcct
gaatcctcaccaacaggttttgaggtgataacggttgtggccatagatcttgacgagccg
ggtaatgccaattcggatattcgttaccgtattgtgagccaggatccaaagttccccagt
ggcccactgtttgagatcaacccaaacactggagcaatcagagtcaatgcccgtgggcta
gacagagagaaatacccaaagcacactctggtgatagaggcagcagacatggagggaaac
gggttgactggaaatgccaaagtaatcatcactgtaacagacagcaatgacaaccctcca
gctttcactctgtcctcttatgaggcaacagtaccagaaaatagagtggacgctctggtc
attacgatggcagtaacagatggtgatgagccacattcaccagcctggaacgccaaattc
aagattgttgatggtgatcctggaggcctgttcacagtcacaacaggaagtaacaaacag
gaagggatcattactactgccaagggtcttgactttgaaatgatcagcaagcacactctg
ttggttgcagtggagaatgacattccatttgctactccactgcccactgccacagccaca
gtggtggtgaacgtgcaggatgtcaacgaagctccagtctttgatccagttgaaaagttt
gtgtccaaaccggagaaccttcctgttgacggtgacgtggtgcagtacattgcttctgac
cccgacattgcacgcaaacagaaagtcatgtataaaataatcagcgaccctgcgggctgg
ctgaacgtggccaaggacacaggcctgattaaggtgaaaagcatcatggacagagagtcg
cactttgtcaaggacagcaaatacacagcactcattggtgcatacgacaatgatgacgtc
ccggccacaggaactggtactctgattatacagcttgaagacgtcaatgacaatgcaccc
ataattgaggaacgtacaataaaggtgtgttacaaggaatcggctcctcagctgctttca
gtaacagataaagatggacctggctttgctgctccatacagtgtctctttacagggcatg
tccaagaccaactggaccgctcggatgaatgattccaaaacgggcatcgtacttaattta
ggcactgagctggaaagtggagaatacactgtggtcctgagggttacagacaacgatggc
atggagcaggacaacaccgtccaggccacagtgtgtgactgcacaggaaatgttgtgtcc
tgtgttgccggtgggagcagcctgcccatgattcttggaatactgggaggcatcctgttg
ctgctcagtgagtctttgattctagttcaatttgaaaagatttatatcgaagtcctaggg
aagaactttagcctgtaa
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