Hippoglossus hippoglossus (Atlantic halibut): 117775363
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Entry
117775363 CDS
T07778
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117775363 (sorcs3b)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Others
Others
117775363 (sorcs3b)
Endosome - Lysosome transport
117775363 (sorcs3b)
Endosome - Golgi transport
117775363 (sorcs3b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117775363
NCBI-ProteinID:
XP_034464332
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Position
15:complement(8978543..9020836)
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AA seq
1234 aa
AA seq
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MELWSFWSFSLLAVALLCPLRLNFVAQAEISSPRANDRFYRLEVVPLEARGTRQPAEVLH
KVDNCAEVFGTEPDGDLKPDRGKKTRNETQKGLKQEAPIGVETAPNCANRLKIPGKKYDS
VSEDNLRRSTANIFQRKKKVKRSVGPEFSENVDMSISGGAQSRERFVETVQGASSSRGEH
RRTGEETRGSNPRQSEPYVDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLHDFNLGA
VTESSLWRSTDYGSTYTKLNHKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLISSDE
GASYEKYPINFNILSLLFHPSQENWMLAYSHDSKLYSSMDFGRKWQLVHDDVMPGRFYWA
VMGLDKESDVVHIETRIAKGRAQYVKCRAQRCTEGNRQYPFPGDVDTNSLVVQDEYVFTQ
VTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYIS
DSPGVYFTLSLEDLRTSRGPAGNLLVDFYKVEGINGMYLTNKLVDNHIKTFITYNKGQKW
ALLPAPASDVAGNNIHCILPFCSLHLHLEMLENPYTSGPITSKKSVPGIIVATGNIGTAL
SSTNLGMFITSDAGNSWRQIFDEEHNIWFLDNGGALLAVLHAPTPIQHLWISLDEGKKWD
SHSFSAAPLFVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYMGLFSRRCMGGDYQKW
QLHNKGELCVMGEKQIFMKRRPGNRCMLAQDYSRIYSSEPCLCTAFDFECDYGWERQADG
KCSPAFWFNPNGAAKSCSSSQSFLNSTGYRKVLSNNCKEEGGKVYSPRRQACRPRAPRGL
RLSTNQGELSATVGSNVTFNVYLDDGDSPGTSIQLDFGDGIRIIYSNLSRTDDGIKHIYR
TTGIYRVAAAAENSQGSDSSTLFLHITSPVERVYLSAPIVAIRGKEANLTAVVWPSHTRT
LTFFWWFDNSSEPIITLEGSISYTFQREGINKVTVQVASGSTVMQDSKVITVKEFFRSLL
LSFSPALDEHNPDISEWREDIGRVVRTALSQVSGVPEDQLLVSLYPGLPTTAELFILPIE
HTGSSEEPLELIADIFVTALNQDLIQFELKTDVRIIVYMTQQTLAPLVDSNAIHSGSAML
MLLSVVFVGVAAFFIYKFKRKIPWIHVQTEDSHEKEPEVISTVGQNDNLSKVKLSDFSAP
KELMAKDLEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtggtcattttggagcttttcccttttggctgtcgcgctgctctgccccctt
cgcctcaactttgtggctcaagcggaaataagttcaccccgagctaacgatagattttat
cggctggaggtcgtgccgctggaagcacgtggaacccgacaaccagccgaagtcttacac
aaagtcgacaattgcgcagaagtttttggaacggaaccagacggcgatttgaaaccggac
cgtggcaagaaaactaggaatgaaacacagaagggactgaaacaggaggcaccgatcggc
gtcgaaacggcaccaaactgcgcgaatcgtctcaaaatacccggtaaaaagtacgacagc
gtttccgaggacaacttgaggcgaagtactgcgaatatttttcaaagaaagaagaaggtg
aagaggagtgtgggtccagaattcagcgagaatgtggatatgagtataagtggaggagcg
cagtcaagggagaggtttgtggagacggtccaaggtgcctccagctccagaggcgagcac
cggcgcaccggggaggaaacccgggggtccaaccccagacaaagtgagccttacgtggac
acgtccactttcgccctgtcgggagactctgcgcacaaccaggcgatggtgcactggtct
ggacacaacagcagcgtgatcctgatcttgactaagctgcatgacttcaacctgggggct
gtaactgagagctcactctggagatccaccgattacggaagcacctacaccaaactcaac
cacaaagtgggttcaaggacagtcctgagttacctgtacgtctgcccgaccaacaaacag
aagataatgatgctcagcgatccagaggtagagagcgccgttctcatcagttcagatgaa
ggagcgagctatgagaagtatcccattaacttcaacatcttgagcctgctcttccacccg
tcgcaggagaactggatgctggcttacagtcacgacagcaagctgtacagttcaatggac
tttgggaggaaatggcagttggttcacgatgacgtgatgccgggccgattctactgggcg
gtaatggggctggacaaagaatcggatgtggtccacatcgagacgcgcatcgcaaaaggc
cgcgctcagtacgtgaagtgcagagcccagcgatgcacagaaggcaacagacagtacccc
tttcccggagacgtagacaccaactcgctggttgtgcaggatgaatatgttttcacacag
gtaaccaagtcaggaagagccagctactttgtctcctacatgagggaatccttcaagcgg
atgaaactacctaaatattgtcttccaaaggacatgcatatcatcagcacagatgagaag
caggttttcgctgcagtccaggagtggaatcagaacaacacctacagcctgtatatctcc
gactcccccggggtctacttcaccctttcgttagaggatctgagaaccagtcgaggaccc
gccggtaacctgctggtcgacttttataaggtcgaggggataaatggaatgtatctcacc
aacaaactggtggataatcacatcaagactttcatcacctacaacaagggacagaagtgg
gcccttctgccggctcctgccagcgatgtggccggaaataacattcactgcattctgcca
ttttgctcgctgcatctgcatctggagatgttggagaatccctacacgtcaggacccatc
accagcaagaagtctgtacctggaatcatcgtggctacagggaatattggaacagcgctg
tcctccaccaaccttgggatgtttataacatctgatgcaggaaatagctggagacagatt
tttgatgaagagcacaacatttggtttcttgacaacggcggggctctgctggcagtcttg
cacgcaccgacgccgatccaacacttgtggatcagtctcgatgaaggaaagaagtgggac
agtcacagtttctctgcggcacctctgtttgtggatggggtcctgatggagccagaatct
gacaatcacatcatcactttctttgggcacttcagccatcggtcagagtggcagctgatc
aagatcgactacatgggcctctttagcaggagatgcatgggtggggattatcagaaatgg
caactgcacaacaagggggagctgtgtgtgatgggcgagaagcagatcttcatgaagcgc
aggccaggcaaccgttgcatgctggcccaggactattccaggatctattcctcggagccg
tgcctctgcacagcctttgattttgaatgtgattatgggtgggagcgccaggcggacggg
aagtgctcccctgctttttggtttaatccaaatggtgcggctaaaagctgtagcagcagc
caaagcttccttaacagcaccgggtatcggaaggttttgtccaataactgtaaggaggaa
ggggggaaggtttactcccccaggaggcaggcgtgtcgtcccagggcgccacgaggcctc
cggctctccaccaatcagggagagctcagtgccacggtcgggagcaacgttaccttcaac
gtctacctcgacgacggagactcgccggggaccagcatccagctagacttcggggacggc
atcaggatcatctactccaacctgagcaggactgatgatggcatcaagcacatttacagg
acgactgggatctaccgagtggcggcggcagctgaaaacagccagggatccgacagcagc
acgctgttcctgcacatcaccagtccagtggagcgtgtatatctctccgctcctattgtt
gccatcagggggaaggaggctaaccttactgcggtggtttggccgagtcacaccagaaca
ttgaccttcttctggtggtttgacaacagctcagagcccattataaccttggagggaagc
atctcatacacgtttcagagggagggaataaacaaggtcaccgtccaggttgcttctgga
agcaccgtaatgcaggattccaaagttataacagttaaagagttcttcaggtcgctgctg
ttgtcgttctcgccggcgcttgacgagcacaatcctgacatctctgagtggagggaggac
ataggccgcgtggtgcggacagctctgtcacaggtgtcgggggttcctgaagatcagctg
ctggtgtctctgtacccgggacttccgaccacagcggagctcttcatcctgcccattgaa
cacacaggaagcagcgaggagcctctggagctgatagcagatatttttgtcactgccctg
aatcaagacctgatccaatttgagctgaaaactgacgttcgcattattgtctacatgact
cagcaaactctggcaccacttgtggattcaaacgccatccacagtggctcggccatgctg
atgctgctctccgtggtattcgttggcgtcgccgcgttcttcatctacaagttcaaaagg
aaaatcccttggatccacgtccagactgaggacagccacgagaaggaaccggaggtgatc
agcacggtcggtcagaacgacaacttgtccaaagtgaagctcagcgatttttcggctccg
aaagagctcatggcaaaagatctggaggccagaagcagaggaggaattggaagaaacatg
gagagaattgtaacaagggaatttccaaactgtactaatgtctaa
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