Hippoglossus hippoglossus (Atlantic halibut): 117775407
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Entry
117775407 CDS
T07778
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117775407 (npas4l)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117775407 (npas4l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
PAS_4
HLH
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
117775407
NCBI-ProteinID:
XP_034464406
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Position
15:17217454..17222495
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AA seq
741 aa
AA seq
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MVSHRSTKGASKARRDHINHEIRKMRALLPTTHDDQERLSYLHSMAAICTYIRKSVLLRG
VLPGDGSHCSLPYEAFLQALHGFILVTTSHGKLVYVSENVAEYLGLSMIDVLQGDTFYDM
VEPFDVDDVKSNLDMENNSSTERSFICCMQTSKAFKLHHSSYCSMLVRGSFQSVPLPRPS
SSDATEPLFVALCTPTVNRLSSSDSSFCHSFTSIHRLDMTFTQLSDSVLYYLGYSADEMT
GRSWYSLVHPDDLSLSADSHRSIMDTDEGLQVEMVLRLQCKDLSWAWAYTRANKDSECQG
ISCTNYIISETEARFLQKEIGSDAFRPSSPANSCHIAAQQAPHSQTYNNTKSFKRQRTSD
SQREEPAGARVRRESEQGYAACVYSRGGSSPVPSGDVPTALFTPPYSPASSGSPLQQEEL
SHDLLMDVHGYRDQLLSSPEASPSYYSYPEAALTCHPRPSDSLPVAAEHSFDQAAFGAVR
PPSPLSSSSPNYDFQSCTSDARLVPDCLSASDMCGSPVECALHQDDFSLLEQPEGGDLLQ
VQHVPHHHVMHAHSSLLTPNQSPTSSESNQYNEREQAEISILAQQISSLARSFDMYHTIN
PLQPTAHSPLPSAGDWSQHPPHPSVLPLKCDLVLDDGVIDSILKDLDTATRKSSTSDPAV
VSYTYQQGLVCSRSGPRHLEQEPLGPSTATPEETLPAEQFTAMDPFSLQLARYDQNTGLH
QLNHHMHISLQQDGLAKEHLY
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccacagatccaccaaaggagcgtccaaagcccgacgggaccacatcaatcac
gagatcaggaaaatgcgggctctgctgcccaccacccacgacgaccaggagcgtctgtcc
tacctgcactccatggcagccatctgcacctacatcaggaagtctgtcctcctccgggga
gtcctccctggggacggatcgcactgttctctaccgtacgaggcctttctccaggctctg
cacggcttcatcctggtcaccacctcccacgggaaactggtctatgtgtcggaaaatgta
gcagaatacctgggtctgtcaatgattgacgtgcttcaaggagacactttctatgacatg
gtggaaccctttgatgtcgacgatgtaaaatcaaacctggacatggaaaacaactcatca
acagagcgaagcttcatatgttgtatgcaaacctccaaggccttcaagctgcaccacagc
agctattgctccatgctggtcagaggcagcttccagtccgtccctctgccccgtccgtcc
tcctctgacgccaccgagcctctgtttgtggccctgtgcacccccacagtgaaccggctg
agcagctccgactccagcttctgtcacagcttcaccagcatccacaggctggacatgacc
ttcactcagctgtcagacagtgttttatactatctggggtattcagccgatgagatgacc
ggtcgatcgtggtacagcctcgtccatcctgacgacctttcgctgagtgcagattctcac
agaagtataatggacacagatgagggcctccaggtggagatggtgctgagactccagtgc
aaggatctgtcatgggcctgggcctacactcgagctaacaaggactctgagtgtcagggc
atcagttgcactaactacatcatcagtgaaacagaggccagattcctgcagaaggaaatt
ggcagcgatgccttcaggccatcatctccggcgaactcctgccatattgcagctcaacag
gcgccacactctcagacctacaataacactaaatctttcaaaaggcagaggacttccgac
agccagagagaggagccagcaggtgccagagtgaggagggagtcggagcaaggctacgcg
gcgtgtgtctactcccgaggtgggagctcacctgttccctcgggtgacgtccccaccgct
ctcttcacgcctccctacagcccggcctcctccggctcccctctgcagcaggaagagctc
agccatgacctcctgatggatgtgcacggatacagggatcagctgctgtcctccccggag
gcctctccctcctactactcctacccagaggcagcgctcacctgtcacccaagaccctcc
gactccctccctgtggccgctgaacactcctttgaccaggcagcctttggtgcggtcagg
ccgccctctccactctcctcctcatctccaaactatgatttccagtcttgtacatctgat
gctcgattggttccagactgcctgtcggcgtccgacatgtgtgggagcccggtggaatgt
gccctgcatcaagacgatttcagccttctagagcagccagaagggggcgaccttttgcaa
gtgcaacatgtgccccaccaccatgtgatgcatgcacactccagtcttctaacccccaac
cagtctcctacgtcctcagagtctaaccagtacaatgagagggagcaggcagagatcagt
attctggcgcagcagatttcctctctggccagaagctttgacatgtatcacacgataaac
ccccttcagcctacggctcacagccccctgccctcagccggtgactggtcccagcaccct
cctcacccctctgtccttcctctcaagtgtgacctggtccttgacgacggtgtgatcgac
agcatcctgaaagacctggacacggccacaagaaaaagcagcacgtccgaccccgctgtt
gtgtcgtacacctatcagcagggtttagtgtgcagcaggagcgggccccgtcatttggag
caggagcccctcggcccctccacggccaccccagaggagacgctgcctgcagagcagttc
actgccatggatcccttcagtttgcagttggcacgctatgaccaaaacactgggttgcat
caactcaatcaccatatgcacattagccttcagcaagacggacttgctaaagaacacctg
tactga
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