Hippoglossus hippoglossus (Atlantic halibut): 117775416
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Entry
117775416 CDS
T07778
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117775416
04082 Neuroactive ligand signaling
117775416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117775416
Ion channels [BR:
hhip04040
]
Ligand-gated channels
GABA-A
117775416
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117775416
NCBI-ProteinID:
XP_034464423
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All DBs
Position
2:6985998..7017739
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AA seq
467 aa
AA seq
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MDLHSAPNKKVSRIPVMARLVLLLLLLCGCQNSLCSTSLEAQKEASANDNSTVFTRILDG
LLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPM
ERLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLRDDGTLLYTMRLTISAECPM
QLEDFPMDAHACPLKFGSYAYPVSEVVYTWTEGAAKSVVVAEDGSRLNQYHLIGQTAGTE
DIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVT
TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKK
ALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRTSETKLVDP
KKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGVVSST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcattcagctccaaacaagaaagtgagcagaattccagtcatggccagactt
gtgctcctcctgctgctgctgtgtggctgccagaacagcctctgctcgacctccttggag
gctcagaaggaggcgagcgccaacgacaacagcacggttttcaccaggatcctggacggg
ctcctggacggctacgacaaccggctccggccggggctcggagagaacgtcaccgagatc
aagaccaatattttcgtcaccagcttcggcccggtgtctgacacggagatggaatacacc
atcgacgtcttcttccgtcagagctggaaggacgagcgcctgtgcttcaaggggcccatg
gagcggctgccgctgaacaacctgctcgccagcaacatctggaccccggacaccttcttc
ctgaacggcaagaagtccatcgcccacaacatgaccacccccaacaagctgctgaggctg
agggacgacggcactttgctctacaccatgagactgaccatatcagcagaatgccccatg
cagctggaggatttccccatggacgcacacgcctgccctctcaagtttggcagctatgcc
tatccagtgtcagaggtggtctacacttggactgagggagcggcaaagtctgtggtggtg
gcagaggacggctccagactcaaccagtaccacctgattgggcagactgccggcacagag
gacatacacacgagcagaggacagtacacagtgatgatggcccacttctacctgaagagg
aagattggctattttgtcatccagacgtacatgccctgtttcatgacagtaatcctgtcc
caggtctcattttggctaaaccgagaatcggttcctgcgaggaccgtctttggggtgacc
acggtcctgaccatgaccaccctcagcatcagcgccaggaactcgctccccaaagtggcc
tacgccacagccatggactggttcatcgccgtgtgctacgcgttcgtcttctctgccctc
atcgagttcgccacggtgaactacttcaccaagaggagctgggcctgggacggcaagaag
gctctggaagcgcagcacccgaagaaacgagatcccatggtgctttccaaaaagcccaac
aacgtttgctcggccggcgtcaactacacccccaacctcaccaaggacgtgtccatctcc
accatctccaacacgacgtcggtgcagctccggacctccgagaccaagctggtggacccc
aagaagacctacaacagcgtcagcaagatcgacaagatgtcgcggatagtgttccccgtc
ctgtttggaaccttcaacctcgtctactgggccacgtacctcaacagggaaccagtggtg
aaaggagttgtcagctcaacgtaa
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