Hippoglossus hippoglossus (Atlantic halibut): 117775521
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Entry
117775521 CDS
T07778
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117775521 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117775521 (srfb)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
117775521 (srfb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
117775521
NCBI-ProteinID:
XP_034464654
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All DBs
Position
15:17580591..17605189
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AA seq
590 aa
AA seq
DB search
MLPSQVGSAPPGNGSASGRGTTGHGAGVVGSGVRPVLVRAGQALQGVGECAAGRQGERDA
IGMLGANCPGGPRGVRPGNGTGVTSLQSAVQGSMVGLNAGVVLPHGARFDPDRESAPLCS
GSDNDSDSAEDDDPVGSLGDSRRGVKRERGEMEAAVTGQEVGVAPGGYGMVPGGVAGAKP
GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT
FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESM
GDTKDSLKPAFTVASLPGSTQSTVPTTSTTMQVSSGTSFPLTNYLAPVSASSNISANGTV
LKAGGSTGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAQQPQQGQ
QAVFRFPAAVSLTGAGVPQQLQAIQVHQNTQSSEHNQDISHTSTNSTATVSLPATIVTSS
IPTSVAGHMMYPSPHTVMYASSSGLTDGGLAVLNAFSQGTSAMQVSHAQGQDGGGVPQVF
LTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDVAQNSKSD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatcggcaccacctgggaacggctcagcttcgggcagggga
accacagggcacggcgcgggggttgtcgggagcggggtccgtcccgttttggtgagagca
gggcaagctttacagggggtcggcgagtgcgctgccgggcgacaaggggagagagacgcc
atcgggatgctgggggctaactgtcctgggggtccgagaggtgtgcggccggggaacggg
acaggcgtgacctccctgcagagcgccgtgcaggggagcatggtggggctgaacgcgggg
gtcgtgttgccgcacggagcgcggttcgacccggacagagagagcgctccgctgtgcagc
ggctcggataacgactcggactccgcggaggacgacgaccccgtgggttcactcggggac
agcaggagaggggtgaagcgggagagaggggagatggaggcggcggtgacgggacaggag
gtgggagtagctcccggaggttacggcatggtgcccggtggggtcgcgggggcgaagccg
gggaagaagacacgtgggcgcgtcaagataaagatggaatttattgacaacaagttgaga
cggtacacgactttcagcaagaggaagaccggcattatgaagaaggcctatgaactctcc
accctgacgggaacccaggttcttctgctcgtggccagtgaaacaggtcacgtttacact
tttgccactcgcaagctccagccaatgatcaccagtgaaacaggcaaagccctgatccaa
acatgcctcaactcgccggactcgccgccacgatctgacccgtccacggaccagcgcatg
agtgccacaggctttgaggagacggacctcacctatcaggtgtcggagtcggagagcatg
ggtgacacaaaggattcactgaagccggcgttcacggtggccagccttccaggcagcacc
cagtccacagtacccaccacctccaccaccatgcaggtgagcagcggaacttcgtttccc
ctcaccaactacttggcgcccgtctcggccagcagcaacatcagcgccaacggcaccgtc
ctcaaggccggtggctccacaggggtcatgcagctgcccggtggcttcaccttcatgcct
gcaggcacacctctcccccctggcacccccaccattcctctgagccagctgcagcagcac
tccctggccctccaggggcagcatggtcaggccctggcccagcagccacagcagggacag
caggctgtcttccgcttccctgctgctgtctccctcacaggagcaggcgttccccagcag
cttcaggctatccaggtccaccaaaacacccagtcctctgaacacaaccaagacatctcc
catacctccacaaactccaccgcaacggtgagtctcccagcaaccatcgtcacctcatca
atcccaacgtcggtggcgggtcacatgatgtaccccagcccccacactgtaatgtacgcc
tccagctcggggctgaccgacggggggctggccgtgctcaacgccttctcccagggcacc
tccgccatgcaggtgtcccacgcacagggtcaagatggaggtggtgtccctcaggtgttc
ctcacggcacctcccggcacggtacagatccctgtttctgcggtgcagcttcacccaatg
gtgattggtcagcagtcgagcggcagcagcagtaacctgaccgagctgcaggtggtcaac
ctggacgtggcacagaactcgaagagtgactga
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