Hippoglossus hippoglossus (Atlantic halibut): 117775653
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Entry
117775653 CDS
T07778
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04371
Apelin signaling pathway
hhip04514
Cell adhesion molecules
hhip04520
Adherens junction
hhip05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117775653
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117775653
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117775653
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117775653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117775653
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117775653
04090 CD molecules [BR:
hhip04090
]
117775653
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117775653
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Major cadherins
117775653
CD molecules [BR:
hhip04090
]
Proteins
117775653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
TM_ErbB1
PKD_4
K319L-like_PKD
Y_Y_Y
Big_13
Motif
Other DBs
NCBI-GeneID:
117775653
NCBI-ProteinID:
XP_034464880
LinkDB
All DBs
Position
15:complement(24175118..24193447)
Genome browser
AA seq
949 aa
AA seq
DB search
MAVGILLIVFQASALETTEEPKCVPGFKSDVLIFRVTRKHLGPGTRLGRVGFNDCTNRTR
FLFISNDRRFMVHPDGILMVINIDLSQSEIQSVAKITCQSTPGEEYHQTVPVKRMVALLE
GHQDFFIHSWNLHGQKMTVPVTVVHYGHLHGQNDGHHHGQHRGENHGHHQQNVEHHLGEH
RHHNNQHHLNEVDSANNTENATTPEVPVLNFPKSGDGLKRRKRDWVIPDINVPENNKGPY
PLKVSQIRSSEDKVKTISYSITGPGANEPPLGLFTMDRLTGTLYLTQPLDREKVDRYTFQ
AHAAVDGSLNAEQPMDIMVIVIDHNDNKPVFGQDTFLGEVPESSPTGFEVITVVAIDLDE
PGNANSDIRYRIVSQDPKFPSGPLFEINPNTGAIRVNARGLDREKYPKHTLVIEAADMEG
NGLTGNAKVIITVTDSNDNPPAFTLSSYDATVAENRVDALVITMAVTDGDEPHSPAWNAK
FKIVDGDPGGLFTVTTGSNKHEGIITTAKGLDFEMISKHTLLVAVENDIPFATPLPTATA
TVVVNVQDVNEAPVFEPVEKFVSKPENLPIDGDVVQYIASDPDIARKQKVMYKIISDPAG
WLNVAKDTGLIKVKSIMDRESHFVKDSKYTALIGAYDNDDVPATGTGTLIIQLDDVNDNA
PIIEERTIKVCYKESAPQLLSVTDKDGPGFAAPYSVSLQGMSKTNWTARMNDSKTGIVLN
LGTELESGEYTVVLRVTDNDGMEQDNTVQATVCDCTGEIVSCSGRIAGGSSLPMILGILG
GILLLLMLVLLLLLFARRRGGEKKEPLLQDDDIRDNIYYYDEEGGGEDDQDYDLSVLHRG
LDNRPEVFRNDVMPNFMPAPQYRPRPANPEEIGNFIDDNLKAADNDPTAPPYDSLLVFDY
EGGGSDAGSLSSLNSSSSGDQDYNCLNEWGPRFKKLADMYGGGEDDDML
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgggcattttattaatcgtttttcaggcctcagctttagagaccacagaggag
ccaaaatgtgtacctggattcaagtcagatgtgttgatcttcagagtgaccagaaagcac
ctggggccgggtacaaggctgggcagagtgggcttcaatgactgcacaaaccgcacaaga
tttcttttcatcagtaatgacagacgtttcatggtccatccagatgggatattgatggtg
ataaatattgacctgagccaatcagaaattcagtcagttgccaagatcacttgtcaatct
actccaggcgaggaatatcatcaaactgtcccagtaaagagaatggttgctcttctggaa
ggacaccaggacttctttatccactcctggaacttgcacggtcaaaaaatgactgttcca
gtcacagtcgtgcactatgggcatctccatggacaaaatgatggtcatcaccatggacaa
cacagaggggaaaaccatgggcatcaccagcaaaatgttgagcatcacctcggagagcac
agacaccacaacaatcagcaccacttgaatgaagtggactctgctaacaatacagagaat
gcaaccaccccagaggtgcctgttctgaatttccccaagtctggtgatggattgaagagg
aggaagagagactgggttattcctgacatcaatgttcctgaaaataacaaaggaccctat
cctcttaaagtatctcagatccgttctagtgaagataaagtgaagacgatatcttacagc
atcactggtccaggagctaatgagcctccccttggccttttcacaatggacaggctcact
ggtactttgtatctgacacagcctctggacagagagaaggtggacaggtacacgtttcaa
gcacatgctgcggtagatgggtcactaaatgctgagcagccgatggatattatggtgatt
gtaatagaccacaatgacaacaaacctgtttttggtcaagatacatttctgggagaagtt
cctgaatcctcaccaacaggttttgaggtgataacggttgtggccatagatcttgacgag
ccgggtaatgccaattcggatattcgttaccgtattgtgagccaggatccaaagttcccc
agtggcccactgtttgagatcaacccaaacactggagccatcagagtcaatgcccgtggg
ctagacagagagaaatacccaaagcacactctggtgatagaggcagcagacatggaggga
aacgggttgactggaaatgccaaagtaatcatcactgtaacagacagcaatgacaaccct
ccagctttcactctgtcctcttatgacgcaacagtagcagaaaatagagtggacgctctg
gtcattacgatggcagtaacagatggtgatgagccacattcaccagcctggaacgccaaa
ttcaagattgttgatggtgatcctggaggcctgttcacagtcacaacaggaagtaacaaa
cacgaagggatcattactactgccaagggtcttgactttgaaatgatcagcaagcacact
ctgttggttgcagtggagaatgacattccatttgctactccactgcccactgccacagcc
acagtggtggtgaacgtgcaggatgtcaacgaagctccagtctttgaaccagttgaaaag
tttgtgtccaaaccggagaaccttcctattgacggtgacgtggtgcagtacattgcttct
gaccccgacattgcacgcaaacagaaagtcatgtataaaataatcagcgaccctgcgggc
tggctgaacgtggccaaggacacaggcctgattaaggtgaaaagcatcatggacagagag
tcgcactttgtcaaggacagcaaatacacagcactcattggtgcatacgacaatgatgac
gtcccggccacaggaactggtactctgattatacagcttgacgacgtcaatgacaatgca
cccataattgaggaacgtacaataaaggtgtgttacaaggaatcggctcctcagctgctt
tcagtaacagataaagatggacctggctttgctgctccatacagtgtctctttacagggc
atgtccaagaccaactggaccgctcggatgaatgattccaaaacgggcatcgtacttaat
ttaggcactgagctggaaagtggagaatacactgtggtcctgagggttacagacaacgat
ggcatggagcaggacaacaccgtccaggccacagtgtgtgactgcacaggtgaaatcgtg
tcctgttcagggcgaattgccggtgggagcagcctgcccatgattcttggaatactggga
ggcatcctgttgctgctcatgctggtgctgctactactgctgtttgcgagacggagagga
ggagaaaagaaggagcctcttctgcaggacgatgatatcagagacaacatctattactat
gacgaggagggaggtggagaggacgatcaggactatgacctgagtgttctccaccgtggt
ctggacaaccggccagaggtgttcaggaacgacgtgatgccaaacttcatgccggctcct
cagtaccggcctcgccctgccaacccagaggaaattggcaacttcattgatgataatttg
aaggcagccgacaatgaccccacagcgcccccctatgattccctgctggtttttgactat
gagggcggtggctctgatgcaggaagcctctcctcactgaactcgtcgagcagcggagac
caggactacaactgcctgaacgaatggggaccccgcttcaagaaactggcagacatgtat
ggcggaggagaggatgatgatatgctgtaa
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