Hippoglossus hippoglossus (Atlantic halibut): 117775772
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Entry
117775772 CDS
T07778
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117775772 (tial1)
03041 Spliceosome [BR:
hhip03041
]
117775772 (tial1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117775772 (tial1)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117775772 (tial1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
XOO_2897-deam
DUF4523
Motif
Other DBs
NCBI-GeneID:
117775772
NCBI-ProteinID:
XP_034465084
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All DBs
Position
15:complement(18388060..18397121)
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AA seq
387 aa
AA seq
DB search
MDDDSYPKTLYVGNLSRDVTEILVLQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSLKKDTTNHFHVFVGDLSPEISTEDVKAAFAPFG
KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVNMGGQWLGGRQIRTNWATRKPPAPK
SSQDNCSKLLKFDDVLTQSSPQNCTVYCGGIQSGLSEHLMRQTFSPFGQIMEVRVFPEKG
YSFIRFSSHDSAAHAIVSVNGTAIEGHMVKCYWGKESPDMAKSPQQVEYNQWGQWNQVYG
SPQQQQQQQQQQQQQQQQYGQYVTNGWQVPSYSMYNQTWNQQGFGVEQSQSPAWVGNFGS
QSAQAAAQPAPVMSNLTNFSMAGYQSQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatagctacccgaaaaccctgtatgtgggaaacctctctcgggatgtgacg
gaaattttggttctgcaactcttcacccagattggaccttgtaaaagttgcaagatgatc
acagagcatacaagcaacgacccctactgctttgtggagttctttgaacacagagatgct
gctgcagccctcgcagccatgaacgggaggaagatactaggaaaggaggtcaaagttaat
tgggccaccactcccagtagcctgaagaaagacacaaccaatcacttccatgtttttgtg
ggtgatttgagcccagagatttccaccgaggatgtcaaggctgcttttgcaccttttggg
aaaatctcggacgctcgtgttgtgaaggacatggcgacaggcaaatcaaaggggtatgga
tttgtgtccttctacaacaaactggatgcagagaatgccattgtcaacatggggggacag
tggctcggaggacgccaaatcaggaccaactgggcaacacgtaaaccaccagctccaaag
agttcccaggacaattgctcaaagctgctgaagtttgacgacgtattgactcagtccagt
ccacagaactgtaccgtgtactgtggggggatccagtcaggattatcagaacacttaatg
cgacagaccttctcaccctttggtcaaataatggaagtcagagttttcccagagaaagga
tactctttcatcaggttttcttcccatgacagtgctgcccatgccattgtttccgtcaat
ggcacagccattgaaggacatatggtgaagtgctactggggcaaagaatctcctgatatg
gcgaaaagtccacagcaggttgagtacaatcagtggggacaatggaaccaggtctatgga
agtccgcagcagcagcagcagcagcagcaacagcagcaacagcagcagcagcagtatggt
cagtacgtgaccaatgggtggcaagttccctcctacagcatgtacaaccagacatggaac
cagcaaggatttggagtagagcagtcccagtcaccagcctgggtgggaaactttggatct
cagtcagcccaggctgcagcccaacctgctccagtaatgtccaacttgaccaacttcagc
atggctggctaccaatcacagtga
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