Hippoglossus hippoglossus (Atlantic halibut): 117775794
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Entry
117775794 CDS
T07778
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117775794
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117775794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117775794
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117775794
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GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
117775794
NCBI-ProteinID:
XP_034465125
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All DBs
Position
15:721103..759835
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AA seq
891 aa
AA seq
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MSEAQYINVYDNDLQLNLMPYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRGFRFRYE
CEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHTDPPRVHAHSLVGRHCTE
KGTCTLDVGPNDLTASFSNLGILHVTKKGVVEILCKRLRDERRRHKGHTLTDVEESVCLK
DAKDLGKVMDLNIVRLKFTAYLQDSNGGFTRALKPVVSNPIYDSKSPNASNLKISRMDKT
CGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIVFKTPPYH
SAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPHVQDKEEVLRKKQKPLPHYESWRGGGRG
GGGGAGGFGGGGGGGGGGFQFNQQMNGGGGGGGGAFFTGGFTGFTGGGGAQMSGSTPQTD
VAQHQSDGQTTGSPLQQQLCQIAAALHSRASQSARQTAAALLQYCSTGDARVLLAIQRHL
CGVQDGNGDTPLHLAVIHQQTGVIQQLIHTLLSSQQQNVLNVSNHLRQTPLHLAVITRQV
KVVEVLLRAGADLSLVDKDGRSPLHLAALAGDSATLRPLLAHMGEHHTHLVNTADFHGLH
PLHLAVRRDGERCLRQLVEGGAKINAPEQKSGNSALHLAVRENLFKVACTLITELKADVN
ACTFGGNTPLHLAAGLGSPTLCSMLIAAGADKNMENDEPLFFNYSSEEEDKDEDAPITEQ
EAVASQPINPRKRPAGHTPLDLAKCQRVRNLLTSRQSPTSGRHGSKRIKSSSSEERDCSG
LDEDTLSRLVEVLSVGDVPWRKLAEKLGMMTLTHLYQDSVTPCHHLLQHYKLGGGPLDGL
VDALQSLGLSDGVQLLRSSELRDDKHNTDATVDSGFGSQPMEEEEPPVANE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctcagtacatcaacgtctacgataacgacctgcagttgaacctgatgccg
tacgactacatccctccagtggacataaagaccgagccctacatcccggagacagctcat
ggtccctacattcagatcatcgaggagccaaaacagaggggttttcgtttccgctatgag
tgcgagggtccgtcccatggcgggttaccgggggcctccagtgagaagaacaggagaacg
tacccgactgtgaagatcaataactacgtgggtcacgctcgggtcgaggttcagctggtg
acgcacacagacccccctcgagtccacgcccacagtctggtgggccgccactgcaccgag
aagggaacctgtacgctggacgtgggccccaacgacctcaccgcctcgttcagtaacctc
ggaattcttcacgtgaccaagaaaggtgtcgttgagattctgtgcaagaggctgagagac
gagaggaggagacacaaaggacacacactgacagacgtggaggagagtgtgtgtctgaag
gatgcaaaggatcttgggaaggtgatggacctgaacatcgtgaggttaaagttcaccgcc
tacctgcaggacagtaacggaggattcaccagagcgctcaaacccgtcgtctccaacccc
atctacgacagcaagtcgccaaacgcctccaacctgaaaatctctcgtatggataagacg
tgcggctcggtgctcggaggagacgagatcttcctgctctgtgacaaagtccagaaagac
gacatcgagatccgcttctatgaggaggacgacgagggaggatgggaggcgttcggggat
ttctcacccactgatgtccacaaacagtacgccatcgtgttcaagactccgccctatcac
agcgcagagatcgagcgtcccgtcaccgtcttcctgcagctgaagaggaagaaggccggc
gacagcagtgaccccaaacagttcacctacatcccacatgtccaagataaagaagaggta
ttgaggaagaagcagaaaccgctgcctcactatgaatcctggagaggaggagggcgagga
ggtggaggaggagctgggggtttcggaggaggaggaggaggaggaggaggaggatttcag
ttcaaccagcagatgaacggaggaggaggaggaggaggaggagctttcttcaccggaggt
ttcactggcttcactggagggggaggggctcagatgtcaggctccacccctcagacagat
gttgcccagcaccagagtgacggacagacgacaggttcgcctctccagcagcagctctgt
cagattgctgcggcgctccacagccgagcgtctcagagcgccagacagaccgccgccgcc
ctgctgcagtactgcagcaccggggacgcccgcgtcctcctggctatccagagacacctc
tgtggtgtccaggacggcaacggagacactcctttgcacctggccgtcatccaccagcag
acaggtgtgattcagcagctcattcacactctgctcagcagccaacagcaaaacgtcctc
aacgtgtccaatcacctccgacagacgccgctccacctggccgtcatcacgcggcaggtg
aaggtggtggaggtgttgttgcgggccggggcggacctcagcctggtggacaaagacggc
cgcagcccgctccacctggccgcgctggccggagacagcgcaacactccgccccctgctg
gctcacatgggggaacaccacacccacctggtcaacaccgccgacttccatggtctccac
ccccttcacctggcagtgaggagggacggcgaacgctgcctccgccagctggtggaggga
ggagccaagatcaacgcacccgagcagaagagtggaaacagcgccctccacctggccgtc
agagaaaacctgttcaaggtggcgtgcacgctcatcacggagctgaaggccgacgttaac
gcctgcacgtttggaggaaacacgccgctccacctggcggccggtctgggctcgccaacg
ctctgctccatgctcatcgcagcaggagctgataagaacatggagaacgacgagccgctc
tttttcaactactcgtcagaagaagaagacaaagacgaagatgcaccaatcacagaacag
gaggccgtcgcctctcagccaatcaaccctcgcaagagaccagcaggacacaccccccta
gacctcgctaaatgtcaaagggtgaggaacctgttaacgtccagacagagtccaacgtcc
ggtcgtcatggcagcaagaggatcaaatcaagcagcagtgaagagcgggactgttcgggg
ctggacgaggacacgctgtcccggctggtggaggtgctgagtgttggagacgttccctgg
aggaaactggcggagaagctggggatgatgacgctgacgcacctgtaccaggacagtgtg
acaccgtgccaccacctgctgcagcactacaagttggggggcggtccactcgacggcctc
gtcgacgcccttcagtcgctcggtttgtccgacggagtccaactgctgagaagctccgag
ctgagagacgacaaacacaacacagacgccaccgtcgacagcggcttcggcagccagcca
atggaagaggaggagccacccgtagccaatgagtga
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