Hippoglossus hippoglossus (Atlantic halibut): 117775891
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Entry
117775891 CDS
T07778
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117775891 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117775891 (nvl)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117775891 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
NPHP3_N
TIP49
Mg_chelatase
RNA_helicase
AAA_28
AAA_17
nSTAND3
ATPase
Vps4_C
AAA_18
NACHT
Rad17
ABC_tran
TsaE
Viral_helicase1
AAA_3
IstB_IS21
Zeta_toxin
Cytidylate_kin2
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
117775891
NCBI-ProteinID:
XP_034465335
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Position
15:24753414..24772932
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AA seq
868 aa
AA seq
DB search
MKNRGGGGSDSRLRQRVEQYMASSNREYVDLSAMALELQKLHRMDYGRRNKTAFRIQVEK
VYEAVMKESRLNYLESKHLAKRAKHNRDDNGEGSSSSSSAESSDTEHIQENTPINHMNSS
VTSLYRKGNPDSITCSPRRDQPAPSSDVSTATPPPSAGTVVSTGGWFIDKGRGPEKSNIL
IDLCDEEPTNTATKQTDVSMLEPEKSHRKSKKRTKSSTEIAEPHTLTKKAKSKLPELQYP
TLKFEDVGGNEGTLTEVCKLMIHMRHPEVYQHLGMVPPRGFLLHGPPGCGKTLLAQAVAG
ELQLPMLKVSAPELVSGVSGESEQKLRELFDLAVSSAPCILFIDEIDSITPKREVASKDM
ERRIVAQLLTCMDDLNSLTVTAQILVIGATNRPDSLDPALRRAGRFDREICMGIPDEAAR
LRILKTLCRKLKLPEDFDYQQLAHLTPGYVGADLMALCREAAMTAVNRALLETRGWRQSE
RQISTTELLTNKVQTEAVVTDGEVGEQQTTDMKPVSQEESGQSQLQQGELCHLLQLLKST
DTLSEEELDSLSILMSDFQASLSSIQPSAKREGFATVPDVTWENVGALQDIREELTMAIL
APVRSPEQFKALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE
SERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRRQV
FIMAATNRPDIIDPAILRPGRLDKTLYVGLPPAKDRHEILLTITKGGTKPQLEQDVSLEE
IAFDERCDCLTGADLTALVREASVNALRAYLKGQNPPASSSGHTCSAGSVAHIRVSKQNF
EDAFKKVRPSVSKKDQRTYEQLRESLSR
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaggtggtggcgggtcggacagtcggctcagacagagagtggagcagtat
atggcatccagcaaccgtgaatatgtggacctttcagccatggccctcgaacttcagaag
ttacacagaatggattatggcagaagaaacaagacggctttcaggattcaagtagagaaa
gtgtatgaagctgtcatgaaggaatctaggctgaattatctggagagcaagcacttggct
aagagagccaagcacaaccgcgacgacaatggtgaaggcagcagcagcagcagctcagcg
gagtcgtctgacactgaacatattcaggaaaacactcccatcaaccacatgaacagctct
gttacatctctgtatcggaagggaaaccctgactccattacctgctcacccaggagagat
cagcctgctccaagcagtgatgtcagcacagccaccccccctcccagtgcaggcactgtg
gtctccacaggaggctggttcattgataaagggaggggccccgagaaaagcaacattctc
attgacctctgtgatgaggagccaacaaatacagcaacaaaacagacagacgtgtccatg
ctggagcctgagaaatctcacaggaagtctaaaaaaaggacaaagagctcaactgaaata
gccgagcctcacaccttgaccaaaaaagctaaatccaagttaccagagctgcagtatccg
actctgaagtttgaggacgtaggaggtaatgaaggcacattaacggaggtgtgtaagctg
atgatccacatgcgtcacccagaggtgtaccaacatctgggaatggttcctcccaggggc
ttcctcctccatggacctcctggctgtggaaagacattgctggcccaggctgtggcaggt
gagctgcagctgcccatgttaaaggtgtctgctccggagctggtgtctggagtgtctgga
gaatctgaacagaaactcagagagctgtttgacttggctgtgagctctgctccatgtatc
ctgttcatagatgagatagactccatcacccctaagagagaggtggcctctaaagacatg
gagaggaggattgtagctcagctgctaacctgcatggacgacttgaatagtctgaccgtg
acagctcagatcctggtcatcggcgccaccaacaggccagactccctggaccctgcccta
cgcagagctggacgctttgatagagagatctgcatgggcatcccggatgaagcagctcgt
ctcaggatcttgaagactttgtgtcgaaagctgaagctgccggaggactttgactaccag
cagctagcccacctcaccccaggctatgtgggggctgacctcatggctctgtgccgcgaa
gctgccatgactgctgtaaacagggctctgctggaaacgagagggtggcgtcagagcgag
agacaaatctctactacagagctgttaacaaacaaagttcagactgaggctgttgtgaca
gacggagaggtcggggagcaacagacaacagacatgaagccagtatctcaggaagagtca
ggacagagtcagctgcagcagggggagctgtgtcacctcctacagctgctgaagtccact
gacacactgtcagaggaagagctggacagcctgtccattcttatgtcagacttccaggcc
tccttgtccagtatccagccctcagccaagagggagggcttcgccactgtgcctgacgtc
acctgggagaatgtgggggccctgcaggatatcagagaggagctcaccatggccatactg
gctcctgtgcgttctccggaacaattcaaagcgctgggtctgagtgctccatctggagtt
ttgctggctggacctccaggatgtggaaaaacactgcttgccaaggcagtggccaatgag
tcaggcctcaacttcatctctgtcaagggaccagaactgctcaatatgtatgttggagag
agtgaacgagctgtcagacaggtcttccagagaggacgcaactctgctccatgcgtcatc
ttttttgacgagatcgatgctctgtgtcctcgtcgctcaggccatgagtcaggagccagt
gtgcgggtggtcaaccagctgcttacagagatggacggcttagagactcgacgacaggtc
ttcatcatggctgctacaaaccgaccagatatcattgaccctgccattctgaggccaggt
cgcctagataaaactctgtatgtgggcctgccacctgcaaaagatcgccatgaaatcctg
ctcactattactaagggggggaccaaacctcaactggagcaggatgtcagtcttgaagag
atcgcctttgatgagcgctgtgattgcttaactggggctgacctgactgcgttagtgaga
gaagcatctgttaatgccctgagggcctacctcaagggccagaatcctccagcttcctcc
tctggtcacacatgctccgctgggtcagttgctcacatcagagtcagtaaacagaacttt
gaggatgccttcaagaaagttagaccatccgtgtccaaaaaggatcaacggacgtatgag
cagctcagagagtccctcagcagataa
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