Hippoglossus hippoglossus (Atlantic halibut): 117776004
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Entry
117776004 CDS
T07778
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117776004 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117776004 (dis3)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117776004 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
117776004
NCBI-ProteinID:
XP_034465546
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All DBs
Position
15:complement(7981395..7988477)
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AA seq
951 aa
AA seq
DB search
MLKSKTFVRKTRSGGVVKIVREHYLRDDIWCGSEACTECKQESTVLQTDACLESNLCSYP
HYLIPDTNVVLHQIDVLEDPVIRNVIVLQTVLQEVRHRSAPVYKRLKDIIHEKEKNVYTF
TNEHHRETFIEREPGESANDRNDRAIRVAAKWYSQHLKKLESDMDGLKVVLLTNDQDNKR
KAEESGLLAYKCEEYIKSLIANPELVDRLALSNDDKNEITNSRVIFPEHLPLSRIQAGIK
SGAFLQGTFRASRDNYLEATVFVQGEGDDSTEVLLQGLQHLNRAVYQDVVAVQLLPRDQW
VAPSSVVLQDEGAAKDDDAEEEEEEKALRISVAEAARKPTGKVVGIIKRNWRPFCGMLNV
SHIKESTRHLFTPADRRIPRVRIETRQASTLAGHRILVAIDGWPKDSRYPNGHFVRSLGS
AGDKDTEQEVLLLEHDVPHQDFSQAVLSFLPKMPWAITPEDMGKREDLRNLTVCSVDPPG
CTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNAMDKEAANRGTTVYLCGKRIDMVPE
MLSSNLCSLRSNVERLAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQMRIDDTSK
NDDTTESLRGLNKLAKILKRHRIEKGALTLSSLEVRFHIDSETHDPIDLQTKELMETNSM
VEEFMLLANISVAQKIYDEFSECALLRKHPAPPPSNYDVLLKAAKSKDVEIHTDSAKALA
DSLDGAKVDGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMSQYAQRSSVAFHTQLFFKS
RGILNEEGYVLFVRKNAIIVLIPKFGLEGTVFFDGKDKTAPKLVFDEEGPSLTIEQHTFH
IFDKVKVTISLDESNVQHQKIRMSLIEPVIPGVSVPAPVVEPRPKKPKLEQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtctaaaaccttcgtgaggaagacgcggtcgggcggcgtggtgaagatcgtg
cgggagcattatttgagggatgatatttggtgcgggagcgaagcttgtaccgaatgcaaa
caggagtccacggtgctgcagacagacgcgtgtttggagagcaacctgtgctcgtatcca
cattatctgatccctgacaccaacgtggtgctgcaccagattgacgtgttggaggatcct
gtgattcgcaacgtgatcgtccttcagaccgtgctgcaggaggttcgacaccgcagcgcg
ccggtctataaacgcctgaaggacatcatacacgagaaggagaaaaacgtctacacattt
accaacgaacaccacagagaaacttttattgaacgggaaccgggtgagagcgccaacgac
cgtaacgaccgggcaatccgcgtggcagccaagtggtacagccagcacttgaagaagttg
gagtctgacatggacgggctcaaggtggtcctcctcaccaatgaccaagacaacaagcgg
aaggcagaggagagcggcctgctggcgtacaaatgtgaagagtacatcaagagtctgata
gcaaaccctgagcttgtggatcgtctagcattgtccaatgatgacaagaatgaaatcact
aatagtagggtgatattcccagagcacctccctctgtcaaggatccaagcaggaattaag
agtggtgccttcctccagggtaccttcagagccagcagagacaactacctggaagccaca
gtctttgtccagggagagggggatgacagcacagaggttcttcttcagggtcttcagcac
ctcaacagagcagtgtaccaagatgtggtagctgtgcagctcctgccccgagatcagtgg
gtggcgccctcgtcagtcgtgctacaggatgaaggtgcagcaaaggatgatgatgctgaa
gaagaggaggaggagaaagctttgaggatatctgtcgctgaagcagccaggaaacccaca
gggaaagtggtgggcatcatcaaaaggaactggaggccattctgtggcatgctcaatgtc
tcccatattaaagagtcaacccgtcaccttttcaccccggcagaccgccgcatcccacgt
gttcgcattgaaacacgtcaggcgtccacactggcgggccacaggatactggtggccatc
gatggctggcccaaagactccagatatccaaatggtcactttgtgcgcagcctgggcagt
gcaggggacaaggacacggagcaggaggtgttgctactggagcatgacgtcccccaccag
gacttctctcaggctgtgctcagtttccttcccaagatgccgtgggccatcacaccagag
gacatggggaagagggaggacctgaggaatctgacggtgtgcagcgtggatcctccagga
tgtacagatatagacgatgccctgcattgcagagagctggaaaatggaaaccttgaggtg
ggggtccacatcgctgacgtcagtcacttcatcagacctggtaacgctatggacaaagag
gccgccaaccgtggcaccaccgtgtacctgtgtgggaagaggatagacatggtccctgag
atgctcagctccaatctctgttcactgcgctccaacgtggagaggctcgcgttctcgtgt
atctgggagatgaaccacaaggctgaaattctgaagacacggttcacaaaaagtgtcatt
aactccaaggcatctctgacctacgctgaggcccagatgagaattgatgacaccagcaag
aatgacgatacgaccgagagccttcggggtctcaacaaactcgccaaaatcctcaagagg
cacaggatcgagaaaggggcattgacgctgtcgtccttagaggtccgcttccacatcgac
agtgaaacccacgaccccattgacctccagaccaaagaactcatggagacaaactccatg
gtggaggagttcatgttgctggccaatatttcagtcgcccagaagatttatgatgaattt
tcagagtgcgctctgttgaggaaacatccagcgccgcctccgtccaactacgacgtcctg
ctcaaggctgcaaagtccaaggatgtggagatccacacggattcagccaaggcgctggct
gactctcttgacggggccaaagtggacggcttcccatacttcaacacgctactgcgcatc
ttggccactcgctgcatgatgcaggccgtctatttctgttctggcatggacagcgacttc
caccactacggccttgcttcacccatctacacacacttcacatcacctatcaggagatat
gcagatataatagttcaccgcctgctggcagtggccataggagcagacagcacctaccca
gatttgatggacaaacacaagcagtcagccctctgcaacaacctcaactacagacacaag
atgtctcagtatgctcagaggtcgtctgtggccttccacacacagttgttcttcaagagt
cgaggcattcttaacgaagagggatatgttctgttcgtgaggaaaaacgcgatcattgta
ctcatccctaagtttggcctggaaggaacagtcttctttgacggcaaagacaaaaccgcc
ccgaagcttgtttttgatgaagagggcccctctctgaccatagagcagcacaccttccac
atatttgacaaagtgaaggtcaccatcagcctggacgaatccaatgttcagcaccagaag
atccgcatgtctctgatcgaacctgtgatccctggtgtgagtgttccagcccctgttgtt
gaaccacggcccaagaaaccaaaactggaacagtga
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