Hippoglossus hippoglossus (Atlantic halibut): 117776193
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Entry
117776193 CDS
T07778
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117776193 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117776193 (ptprub)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117776193 (ptprub)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117776193 (ptprub)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
Type II RPTP family
117776193 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Ig_DSCAM-DSCAML_C
Tc-R-P
ig
Ig_3
Y_phosphatase3
PTPlike_phytase
Pur_ac_phosph_N
Ig_2
PTP_tm
Motif
Other DBs
NCBI-GeneID:
117776193
NCBI-ProteinID:
XP_034465754
LinkDB
All DBs
Position
16:14251598..14412647
Genome browser
AA seq
1450 aa
AA seq
DB search
MNTCAFLLILTVQIYADGIEGPTAAGCTFEEDSDPSLCDFTQGEDDDFDWLLFRTYNSPY
AGSDLLKGSYMLVNSSQHAVGHRAQLLLQSLSENDTHCVQFSYFLYSRDGHSPGGLRAYV
RVNGGPVGSSVWNTSGSHGKQWHQVELAVSTFWPNEYQVMIEATVSRERRGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAGQNATFQCVAAGRASEAEKFLLERHNGDIFSTASVKHLS
HRRFVVSFQLDSIQRTDQDLYRCVTQSPRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLDPDTEYRISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLSSTDLQSRQLSLQWENLAFNLTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFTLRDLPPYHGIHVRLSLANPEGKKEGREVN
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLKNETYHMFSNLHPGTTYLISVRARTAKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSTYQVVIEEETVKKVKREIGLQECFPLPMSHGEAQA
RGTPHYYTAELPPSSLPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQHSEEMGLILGVCAGGLVVLILLLGAVIIIIKKGRDYYS
YYPKPVNMNKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRGDARSS
VNEASSLLGGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFF
DGWDCTKKKDKTKGRHDTLLGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNH
FIATQAGPKQETLYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIKISL
LKTETLAEYTVRTFALERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPP
DAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIF
IHDAILEACLCGETAILVNEFAVTYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECS
IALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPG
TTADFWRLVFDYGCTAVVMLNQLNQSNSAWPCVQYWPEPGLQQYGAMEVEFLSMSADDDV
ITRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRT
AVHCLNGGGRSGTFCASNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLDQYRFCYDLV
LEYLDCFEGR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgccttcctgttgattttgacggtccagatctacgccgatggcatcgag
gggccaacagctgctggctgcacgttcgaggaggattctgaccccagtctgtgtgacttc
acccagggggaggatgacgactttgactggctgttgtttcgtacatacaattcaccgtac
gccggctctgacctcctgaagggatcttacatgttggtgaactcctcccagcatgccgtg
ggtcatcgtgctcagctgctgctgcagtccctgagtgaaaatgacacgcactgcgtccag
ttcagctacttcctgtacagtcgcgatggccacagtcccgggggcctcagggcgtatgtg
cgagtcaacggcggtccggtcggaagttcagtgtggaacacgtccgggtctcatggaaag
cagtggcatcaggttgagctggctgtcagcaccttctggcctaatgaataccaggttatg
attgaggcaacggtttccagggagcggcgaggctacattgccatcgatgacatcatggtg
ctcaactatccctgctataaggcaccgcacttctccaggctcggagacgaggaggtcaac
gccgggcaaaatgccactttccagtgtgttgctgctggaagggcatccgaggccgagaag
ttcctgctggagagacacaacggggacattttctcaacagcatcggtcaagcacctgagt
caccggcgctttgtggtatccttccagctagacagcatccagcggacagatcaagacctt
taccgctgtgtcactcagtcccctaggggctccggagtctcaaactttgctgaactcgtc
gtcaaagtacctccgtccccaatcgcaccaccgcagctgctacgtgccggctccacttac
ctgatcatccagctcaacaccaactctatcctgggagacggccccatcatcaggaaggag
attgagtaccgcgccagtcagtctccgtggtcggaggtgcacggggtcaacatggtcacc
tacaagctttggcatctcgatccggacacggagtaccgcatcagtgtgctgttgacccgg
cccggagagggaggaactgggcctcccggaccaccgcttgtgagcaggaccaagtgtgca
gagcccatgcgtgcactgcggggcctctcatccaccgatctccagtccaggcagttgtcc
ctgcagtgggagaatttggcgttcaacctgacacgctgccacacctactcagtgtccctg
tgctaccgctacaccacggcgggaggtggtggcggccacaacaccaccgtgcgcgagtgt
ctggcagtggaacacaatgcctcgcgcttcacgctgcgtgatctgccaccctaccacggc
atccatgtccgcctgtcactggccaatccggaggggaagaaggagggaagagaagtcaac
ttccagaccgaggaggacattcccggaggcatagcaccggagtcgctcaccttcacccca
ctggatgacatgatcttcctcaagtgggaggagcctgtcgagcccaacggcctcattaca
caatacgagatcagttaccaaagcattgagtcgtctgatccaggcatcaacgtcccagga
cctcggagaacagtgtcaaagctgaagaatgagacctaccacatgttctccaacctccac
cctggaaccacttacctaatctcggtccgagctcgcacggccaagggcttcggccagacc
gccctcactgaaatcaccactaacatctcagctcccacatttgattacggagacatgccg
tcccccctgagtgagaccgaaagtacaattactgtcctgctgcgtcctgctcaaggtcga
ggggcacctgtcagcacataccaggtggtgattgaagaagaaaccgtgaagaaagtgaag
agggagatcgggcttcaggagtgtttccccctgcccatgtctcacggtgaagcccaggcc
cgggggacaccacactactacacagccgagctgccacccagcagcctgccagaggccagt
cccttcactgtgggcgacaatcacacttacaacggctactggaacagccctctggatccg
cgcaagagctacctcgtctacttccaagctatgagcaacttcagaggggaatccagaata
aactgcatccgaatcgctcgcaaagccgcctgcaaagaccaccgcaaggctttggaggtg
tcccaacactcggaggagatggggctgattctcggggtgtgcgccgggggcctggtggtc
ctcatcctcctgctgggtgccgtcatcatcatcattaagaaaggaagggactactactct
tactatccgaagccagtaaacatgaataagacgcccattacgtatcgacaggagaagagt
catatgggctccatggagcgtagtttcaccgaccagagcaccttgcaggaggatgaaagg
atggctctttccttcatggatgcacacacctgcggcactcgaggtgatgctcgtagttca
gtgaatgaagccagcagcctgctgggaggctccccgaggcatcagtgtggacgtaaaggc
tccccctaccacacagggcagctccaccctgcagtccgagtggccgacctcctccagcat
atcaaccagatgaagacagccgagggctatggctttaaacaggaatatgagagtttcttt
gatggctgggactgcacaaagaagaaggacaaaaccaaagggaggcacgacactttgctg
ggatatgaccgccacagagttaagctccaccctctcctgggagaccccaactcagactac
atcaatgcaaactacattgacattcggattaacagggaaggctaccatcgatccaaccac
ttcatcgccactcaggcaggacccaagcaggagactctgtatgatttttggaggatggtg
tggcaggagaactgtttcagcatcgtcatgatcactaagctggtggaggttggcagggtg
aaatgctgtaaatattggccggatgacagcgagatgtacggggacattaaaatcagtctg
ctgaagacagagacactggctgaatacacagtccgtacatttgccttggagaggagagga
tactcaaccaagcacgaggtgcgtcagttccacttcacatcctggcctgagcacggggtg
ccctatcatgccactggactgttggcctttatacgaagagtgaaagcctccacgcctcct
gacgctggcccggtggtggtccactgcagcatgggggcgggccgcaccggctgctacatc
gtgctggacgtcatgttggacatggccgagtgtgaaggcgtggtcgatatctacaactgt
gtcaaaaccctctgctctcgacgcatcaacatgatccagacagaggagcagtatatcttc
atccacgatgccatcctggaggcgtgcctgtgtggagagacggccatcctggtgaatgag
tttgccgtcacctacaaagagatgctgcgggtggattcccagagtaattcctctcagcta
cgggaagagttccagacactcaactctgtgactccccacttggatgtggaggagtgcagc
attgccctgttgcccagaaaccgggagaagaaccgcagcatggatgtcctgccgccggat
cgtgccctggccttcctggtcaccacagaaggggagagcaacaattacatcaacgctgct
ctcgccgacagcttccaccgacaggccgctttcatcgtgacgccgcaccctctgccgggc
accacggcggacttctggaggctggtctttgattacggctgcacggcggtggtcatgctc
aaccaactcaaccagtccaactctgcttggccgtgtgttcagtactggccggagccgggt
ctgcagcagtatggagccatggaagtggagtttctgtccatgtcagcagacgatgatgtc
atcactcgtctgtttcgggtcaagaatgtcacgaggctccaggagggtcagctggtggtg
tgtcagttccagttcctgcgctggtcggcataccgcgatgtccccgactccaagaaggct
ttcctcaacctgctggcccaagtgcacaagtggcaaagagagtgcggagaaggacgcaca
gccgtccactgccttaatggcggcggccgcagtgggaccttctgtgcctcgaacatcctc
ctcgagatgatccagtaccagaacatggtggacatcttctacgccgtcaaaactctacgc
aactgcaaacccaacatggtggagtctctggatcagtatcgattctgctacgaccttgtc
ctggagtacttggactgcttcgaggggagatag
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