Hippoglossus hippoglossus (Atlantic halibut): 117776240
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Entry
117776240 CDS
T07778
Symbol
rims2a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 2 isoform X1
KO
K15297
regulating synaptic membrane exocytosis protein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117776240 (rims2a)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117776240 (rims2a)
Small GTPases and associated proteins
Rab associated proteins
117776240 (rims2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
TPR_Nup160_C
Motif
Other DBs
NCBI-GeneID:
117776240
NCBI-ProteinID:
XP_034465843
LinkDB
All DBs
Position
16:24811844..24945225
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AA seq
1673 aa
AA seq
DB search
MSAPHGPRGGPGPAAAAAAAAAASATGAMPEMPDLSHLTEDERKIILGVMDRQKKEEAKE
QSMLKIKEEPKPQPAQWFPFSGITELVNNVLQPQQKSQNDKEPEPDAKLHQQFESYKDQV
KKMGDETKPVQDQKSEAPTCGICHKTKFADGCGHLCSYCQTKFCARCGGRVSLRSNKEDK
VVMWVCNLCRKQQEILTKSGAWFYSSEAGQVRGVFEGGPQGKKAKLQDPSLYPYQGASGD
LKPASDRSRPRGGLLPRQGSLDNGAGLRYSGPGDEPIERKRSPSASRDPNQKYDQREGGD
HSQYAPTDGGMPRSPSDYGDGDPRRAPRGPHMYPDVDAARMGYRDRRGPGRWHSQEYPLD
QELDGPPSEYDLQRQRQEEFQTRYRSDPNLARYPVKPQPYEEQMRMHAEVGRLRHERRHS
DVSLAYTEQDEPGPIRLSRQHLTERRPPMVGQRSYSVDRSSPGPMGPGLGGHRTSNHSPP
TPHRSPVLGDRSGDLRRGDLGVDPMRRQQHHLDPSSAVRKTKREKMESMLRNDSLSSDQS
ESVRPPPPKPHKTKKGGKMRQVSLSSSEEELATTPEYTSCEDVEIESESVSEKGDSQRGK
RKTIEQAFMSEPTHTLSERQKKMVRFGGHSFEEDLAWCEPQVKDSGVDTCSSTTLNEEHS
HSEKHPVTWQPSKDGDRLIGRILLNKRMKDGSVPRDSGALLGLKVVGGKMTESGRLCAFI
TKVRRGSLADTVGHLRPGDQVLEWNGKLLQGATFKEVYNIILESKPEPQVELVVSRPIGD
IPRIPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPSMLRDAPQYLSGQLSSQSLSRRT
TPFTPRVQVKLWYDKVGHQLIVTILGAKDLPPREDGRPRNPYVKIYFLPDRSLNYCSSSD
KSKRRTKTVKKSLEPKWNQTFMYSPVHRREFRERMLEITLWDQARLREEESEFLGEILIE
LETALLDDEPHWYKLQTHDVSSIPLPRASPNTQRRQLHGESPTRRLQRSQRISDSEISDY
DCEDGVGVITDYRSNGRDFQSSTLSVPEQVMSSNHCSRSADINRARSRSPSVPPPSSRSL
DPAFDLRPSQYSSTSRVDDHSVSEANYSPDSRNHRMYPICREEAVRLLRSTRMARAYSEG
AYSSDYDFERNHGSMDRHEYHSRSRSADQRPTIERPTSRSRSTERPHDSSLMRSMPSLPS
GRSAPPSPALTRAHPRSGSVQTSPTSTPMSSRRGRQLPQLPHTGKDRKDGDEGTEPCEED
TDSPSWTNSGMDMEERTRQMKLKMNKYKQGAGSDSRLEQDYHKRSGRDPRGSDNLSAKSS
DSDVSDVSAVSRTSSASRFSSTSYMSVQSERPQGNRKIRDFASKMKNRQMGSTGGMNITK
STSISGDMCNLEKTDGSQSDTAVGTVGTDDKKRRSSIGAKMQAMVGMSRKSRSTSQLSQT
EAGGKKLRSTIQRSTETGLAVEMRSRMTRQASRESTDGSMNSYSSEGNLIFPGVRLSSDA
QFSDFLDGLGPAQLVGRQTLATPPMGDIQIGMVDKKGALEVEIIRARGLVGKPGSKSLPA
PYVKVYLLENGVCIAKKKTKVARKTLDPLYQQPLPFEESPGGKVLQVIVWGDYGRMDHKS
FMGAVQILLDELDLSNMVIGWFKLFPPSSLVDPTLAPLTRRASQSSLDSFSRS
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccacacgggccccggggcggccctggccctgctgctgctgctgctgctgct
gctgctgcctcagcgaccggcgccatgccggagatgccggacctcagccacctcaccgag
gatgagaggaagatcatcctcggtgtcatggaccgacagaagaaggaggaagcgaaggaa
cagtcgatgttgaagatcaaagaagaaccaaagcctcagccggcacagtggtttcccttt
agtgggatcactgagctggtaaataacgttcttcagccccagcaaaagtcccaaaatgac
aaggagccagagccagacgcgaagttgcaccagcagtttgaatcgtataaggaccaggtt
aagaagatgggagatgagactaagccggttcaggatcagaagagcgaagccccaacctgt
gggatatgccacaaaaccaagtttgccgatggctgtggccacctctgttcatattgccaa
acgaaattctgtgctcggtgcggaggacgggtgtctctgcggtcaaataaggaggacaaa
gtggttatgtgggtatgcaacttgtgccgaaaacaacaagaaatcctcaccaagtcgggg
gcgtggttctacagttcggaagccggtcaggtgcggggtgtgtttgagggcgggccacag
gggaagaaggccaaactgcaggacccgtccctctacccctaccagggagcctcaggggac
ttgaaaccagcgtcagacagaagcagacctcggggtgggctcctgcccagacaggggtcc
cttgacaacggtgcggggctgaggtactcgggaccaggcgacgaacccatagaaaggaaa
cgaagcccatctgcatccagggatccaaaccaaaaatacgaccaaagggaggggggtgac
cactcacagtatgccccgacggacggcggcatgcccagatcaccgtccgactatggggat
ggggaccctcggcgggctccgcggggcccacacatgtacccagatgtggatgcggcacgg
atgggctaccgggaccggcggggccctggacgctggcactcccaggaatacccactggac
caggagctagatggaccgcccagtgagtatgacctccagcggcagcgccaagaggagttc
cagacgcgctaccgcagtgaccccaacctggcacgctatcctgttaagccacagccctat
gaggagcagatgaggatgcatgccgaggtgggccgcctgagacatgagcgccgccacagt
gatgtctccctggcttacacggagcaggacgagcctgggcccattcggctgtcccgacag
catctcaccgagcgccggccgcctatggtgggacagcgctcctactctgttgaccggtct
tccccagggcccatgggtcctggccttggaggtcacagaacctccaaccacagcccccca
acgccgcaccgaagccctgtgctgggtgaccgatccggggacctgcggagaggagacctg
ggtgtggatccaatgaggaggcagcaacaccatttggaccccagttcagctgtccgcaaa
accaagagggagaagatggagagcatgttgaggaacgactctctcagctcggaccagtcg
gagtcagtgcgcccgccaccccccaagccccataaaaccaaaaagggagggaagatgcgg
caagtgtcactgagcagctcagaggaggagctggccactacaccggagtacaccagctgt
gaggatgtggagatagagagtgagtcagtcagtgagaaaggggacagtcaaaggggaaaa
agaaaaactattgagcaggcatttatgtccgagccgacacacaccttatctgagaggcaa
aagaaaatggtgcgctttgggggacactcatttgaagaggacttggcatggtgtgaaccg
caggttaaagactcgggagttgatacgtgcagtagcactaccctaaacgaggagcatagc
catagtgagaagcacccggtgacgtggcagccgtccaaagatggggatcgcctaataggg
cgaattttgctcaacaagcgaatgaaagatggaagtgtgcctcgagactcaggagctctg
cttggtctgaaggtggtgggaggcaagatgacagaatctggtagactttgtgctttcatc
actaaagtgaggagaggaagtctagcagacactgttggacacctcagaccaggtgaccag
gttctggagtggaatgggaagcttttacaaggagccacatttaaagaagtttacaatatc
atactagaatccaagcctgagccgcaggtggagttggtggtctcacggcctataggagat
attccaaggataccagacagcacacatgcacaactggaatcaagttcgagttcttttgag
tctcagaagatggatcgtccgtccatctccgtcacatcccccatgagtcccagtatgctg
agggacgccccccagtacctgtcaggacagctttcaagccaaagccttagtagaagaaca
acgccttttacccctagggtccaggtcaaactgtggtatgacaaagtgggccatcaacta
atcgtcaccatcctgggcgccaaagatctgccccccagggaagacggccggcccaggaac
ccttacgtcaaaatctatttcctccctgatagaagtttgaattattgttcctccagcgac
aaaagcaagaggagaacaaaaacggtaaagaaatccttagagcccaaatggaaccagacc
tttatgtactcaccggtgcaccggcgggagtttcgggagcgcatgctggagatcacactg
tgggaccaggccaggttgagggaggaggagagcgaattcctgggggagattctgattgag
ctggagacggctctcctggacgacgagccacactggtacaagctccaaacacacgacgta
tcctccatcccactcccacgtgcctccccgaacacgcagcgcaggcagctccacggagag
agtccaacgaggcggctgcagagatcccagaggataagtgacagtgagatctcagactac
gattgtgaagatggtgttggggtaataacagactaccggtcgaatggcagagacttccag
agctccacgttgtcggtccctgagcaggtgatgtcatctaaccactgctctcggtcagct
gatataaacagggcacggtcacgctctcccagcgttcccccgccctccagcagaagtctg
gacccagcctttgaccttaggccctctcagtacagctccacctctagagtggatgaccac
agtgtgtccgaagctaactactcacctgacagccgcaaccatcgcatgtaccccatctgc
agagaggaagcagtcaggttactgcgttctactaggatggcccgcgcctattctgagggc
gcctactcctccgactatgactttgagaggaaccacggatccatggatagacacgagtat
cacagcaggtcccgctctgcagaccagcggcccactatagagcgccccacatcccgctca
cgctccactgaacgcccccacgactcttcgctcatgaggtccatgccgtctctgccatct
gggaggtccgcccccccctcacctgccttgacgagggcgcatcctcgtagtggatcggtc
cagacgagtcccaccagtaccccgatgtccagcagacgaggacgacaactaccacagctt
ccacacacagggaaggacagaaaagatggagacgaaggaacagagccttgtgaagaagac
acggactcaccaagttggacgaactcaggtatggacatggaagagagaaccaggcagatg
aagctgaagatgaacaagtacaagcagggggctggctctgactccagactggagcaggac
taccacaagcgttcgggcagagatccacggggctccgacaacctgtcggccaagtcatcg
gacagtgatgtaagcgacgtgtccgctgtgtcgagaactagtagcgcctctcggttcagc
agcacgagctacatgtctgtccagtccgaaaggccgcaaggaaatcgcaagatccgtgac
tttgcatccaaaatgaaaaacaggcaaatgggctcgacaggcgggatgaacatcaccaag
agcacaagcatcagtggcgacatgtgtaacctggagaagacggacggcagccagtcggac
acggcggttggcacggtaggcactgacgacaagaagaggcgctccagcattggtgccaaa
atgcaggccatggttggcatgtcgcgcaagagccggagcacctctcagctcagccaaaca
gaagcaggaggtaagaagttgcgcagcactatccagaggagtacagagacgggcctggcg
gtggagatgaggagcagaatgactcggcaggccagccgggagtccactgacggcagcatg
aacagctacagctccgagggaaatctcatcttccctggtgtgcggctctcctcagatgcc
cagttcagtgacttccttgatggtctgggtcccgcccagctggttggacgtcaaacattg
gccactccacctatgggtgacatccagatcggcatggtggataagaaaggagcactggag
gtggagatcatcagagcccgtggccttgtgggaaaaccaggttccaagtcactgccagca
ccgtatgtaaaggtctaccttttggaaaacggagtctgcatagccaaaaagaaaacaaaa
gtagcaagaaaaaccttggatcctctttaccagcagccactgccgtttgaggagagtccg
ggagggaaggttttacaggtcatcgtatggggggactatggacgtatggaccataaatca
ttcatgggagcagttcagatactgttagacgagctggacctgtccaacatggtgattggc
tggttcaagctctttcctccttcctcactggtggaccctactctggccccactgacaaga
agagcttcccaatcctcactggacagtttctctcgatcatag
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integrated database retrieval system
