Hippoglossus hippoglossus (Atlantic halibut): 117776266
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Entry
117776266 CDS
T07778
Symbol
mex3a
Name
(RefSeq) RNA-binding protein MEX3A
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117776266 (mex3a)
04121 Ubiquitin system [BR:
hhip04121
]
117776266 (mex3a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117776266 (mex3a)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117776266 (mex3a)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117776266 (mex3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
KH_2
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117776266
NCBI-ProteinID:
XP_034465968
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All DBs
Position
16:complement(4670776..4682786)
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AA seq
522 aa
AA seq
DB search
MPSLLVLAGIMEKNGGYGGDLAGSGFGSEGLLVPPDEEEDDSRALRVALGQLSLLGLGEG
EDGGGAPTTGVQDRSNNNNNHHNHTNSVGGGGDTAILQGKSKLCALYESSSSETKGRGCN
ITECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALARR
EIISAAEHFSMLRASRNKLGVSFSGSPPTPLPGQTTIQVRVPYRVVGLVVGPKGSTIKRI
QQQTCTYIVTPSRDRDPVFEITGSPSNAERAREEIEAHIAFRTGGLHDHNNENDCMGPNG
GSSPAGSSGGLESRLQQVWGLQGGQRKPLTSSYRQNFSDAMVGGGGGGEGGGIYNKSNFS
SSGEKNCSYFGSEGTQSWGDPDYPKQVAFYAQQRSKSFGGLPLPLTRLSPGLSDSCGGGG
TNNSSVTSIVPVAGSPHAQARRAHSEPTSAGEGFPGRLPVPDSPPAIVRDCMTCFESKVT
AALVPCGHNLFCMECAIRICELNHPECPVCHTQVTQAIRIFS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcctgctggttctagcagggatcatggagaaaaatgggggctacggcggggat
ctggccggctccggcttcggcagcgagggtctccttgtgccgcccgacgaggaggaagac
gactcccgtgccctcagggtcgcgctgggccagttgtctctgctggggctcggggaaggc
gaggacggcggcggagccccgaccacgggagtacaggaccggagcaacaataacaacaac
caccacaaccacacgaacagcgtcgggggtggcggggacacggcgatcctgcaagggaag
agcaagttgtgcgccctgtacgagagctcctcaagtgagacgaagggacgaggctgcaac
ataacagaatgcgtcccagtgcccagctccgaacatgtggccgagatagtggggagacaa
ggttgcaagattaaagccctgagggccaagaccaacacctacatcaaaaccccggttaga
ggagaggagcctgtgttcctaatcactggccggaaggaggatgttgcactggcccgccgt
gaaatcatctctgctgcagagcacttctccatgctccgggcgtcccgcaacaagctgggg
gtgtccttcagcggctccccgcccacacctttgccaggtcagaccaccattcaggtgaga
gtgccataccgtgttgtggggctggtagtggggcctaaaggctccaccatcaagcgcatc
cagcagcaaacctgtacgtacatcgtcactcccagtcgagaccgcgaccctgtctttgaa
atcacggggtcaccgagcaacgccgagcgcgcccgcgaggagatagaagcacacatcgcc
ttccgaacaggaggcctgcatgaccacaataatgagaatgactgtatggggccgaacggt
ggaagcagcccggcgggcagcagcggtggtctggagagccggctacagcaggtgtggggt
ctgcaggggggccagcgcaagcctctcaccagcagctaccgccagaacttctcagatgcc
atggtcggagggggagggggaggcgagggagggggaatctacaacaagagcaacttctcc
agctctggagaaaagaattgctcttattttggatccgaggggacccagagctggggcgac
cccgactaccccaaacaggtggccttctatgcccagcagcgttccaagagcttcggaggc
ctcccgctccccctgaccagactctcccctggcttatccgattcctgcggaggtggaggt
accaacaactcctcagtcaccagcattgtgcccgtagccggctcacctcatgcccaggcc
cgccgcgcccacagtgagcccacttcagccggcgagggcttcccaggccgtctgccagtt
ccggactcgccaccggccatcgtgcgggactgcatgacctgctttgagagcaaagtgacg
gctgccttggtgccctgtggccataacctcttctgcatggagtgcgccatccgaatctgt
gagctcaaccacccggagtgcccagtgtgccacacccaggtcacacaggccatccgaata
ttctcttaa
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