KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117776354
Entry
117776354         CDS       T07778                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
  KO
K10602  E3 ubiquitin-protein ligase NHLRC1 [EC:2.3.2.27]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117776354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hhip04121]
    117776354
Enzymes [BR:hhip01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117776354
Ubiquitin system [BR:hhip04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117776354
SSDB
Motif
Pfam: NHL zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 117776354
NCBI-ProteinID: XP_034466107
LinkDB
Position
16:complement(13370114..13371666)
AA seq 421 aa
MAVNRGPGRCGSLSPEGILREAQINLLECKVCFEKFSSQQRERRPRNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQMCSVDSTSHCQAICDLQELLLSRSPRSSAPPHRATGGFKSAAG
LTSSALHLHSAFGGWGTLINPTGIAVLGSSGTIVVVHDGEKRVVVFSPQGKLLNSFGRRG
QASGELWYPVDVAVTPCGYVVVTDAGDKAVKIFTSRGNHVLTVRDSFQVPWGVGTDGDGH
LLVTDIQAGALFHVKVDYTRGVVLEHRTAISELQQPKAVACCPVTGNTAVMEHLTDHTPP
PVRQQHTRLKVFNKDFHLLHQTDTFSLTLQSTVRLNMSGVVFDADGDVLVTDCKQGMVWS
LGKLQNGPVLTPLVGDHLIRPVGLVTLDNMLIILDSGEHAVKIYMVKSDTGSTTKLMCEQ
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgtgaatcgtggtcccggacgttgtggcagcctgagtcctgagggcatcctgaga
gaggctcagatcaatttgctggagtgtaaagtctgcttcgagaagttcagcagccagcag
agagaacgcagaccacggaacctttcctgtggccatgtactgtgtctggaatgcatcaca
gctctgtcccaccctctcctgaggaagctggagtgcccgttttgtcgacagatgtgcagt
gttgacagcacctcccactgccaggctatttgtgacctccaggagctgctgttgtcccgg
agtcccagatcctctgctcctcctcacagggcgacagggggatttaagtcggctgcagga
ctgacatcctcagccctgcacctccactcagcttttggtggctgggggactctcatcaac
cccactgggatagctgttttagggtcctcagggacaatagtggtggtccatgatggagag
aagagggtggtggtgtttagcccacagggcaaactgctgaacagttttgggcgaagagga
caagccagtggagagctctggtacccagtggatgtggcggtgactccctgtggttacgtg
gtggtgactgatgcaggggacaaagctgtgaagattttcacctccagagggaaccacgtg
ttgacggtcagggattccttccaggtgccctggggtgtgggcacagacggcgatgggcac
ctcctggtcacagacatccaggcaggcgcgctgttccatgtcaaagtggactatactcgt
ggtgttgttctggagcatcgtacggccatttctgagctccagcagccaaaagcagtggcc
tgctgtccagtgacagggaacactgcggtgatggagcatttaaccgaccacacacctcca
ccagtgaggcaacaacacacaaggctgaaagtgttcaacaaagacttccacctgctccat
cagacagacactttcagcctgactctgcagtccacagtcaggctgaacatgtcaggtgtg
gtgttcgacgcagatggagatgtgctggtaactgactgtaaacaggggatggtttggagt
ctggggaagctgcagaatggcccggtcctcactcctcttgtgggggaccacctgatccgc
ccagtcggcctggtgacactggacaacatgctcatcattctggacagtggagagcatgca
gtcaagatttatatggtcaaatctgacactggatccacgacaaagctcatgtgtgaacag
gcctag

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