Hippoglossus hippoglossus (Atlantic halibut): 117776398
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Entry
117776398 CDS
T07778
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117776398
Membrane trafficking [BR:
hhip04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117776398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
Spectrin_SESTD1
PH_10
hSH3
CRAL_TRIO
UreE_C
Spectrin
Motif
Other DBs
NCBI-GeneID:
117776398
NCBI-ProteinID:
XP_034466166
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All DBs
Position
2:5897474..5938574
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AA seq
1218 aa
AA seq
DB search
MGEIERAFGNTNEEESGMRRVRFFSLVEDMKTAREEEESRRRDERKGGKRGFGGERLVSI
SLEEMESYYRYALCCRQLYNDIMHGEDGPLCAAEIGSELQKQFAILPGGRGINGRPIMVF
PEFPEFSELEEEELQSVLRYLTSVPSVAASGVGFILVIDRRLDRWAAVRATLLRIAGSFP
GNLHLVLVLRPTTLLQRTLSDFLFKFNRDEFKMKVVMLSSVTELHAYIDPGQLTTELGGT
QEYHHESWISHRTAIEAFALMVKTTAQTLQAFGTELAETELPNDAEATTNLLHTHTLKKD
TMKEDLQVALSQGGRLLDCINEPLQTDPEYSMTHDELENLETVQRLLGQLDETETAFDDF
WERHRTKLEQCLQLRHFEQHFREVRAQLDVTSERLSGFSEVSVSPAHGEHVLRELAGHED
KACDVLDRALSLACEGDRLIENSHYAEDSIRPKCSELREVCDEISATLRCKKNLLLRAME
MHHSLEKASQWCEEGIFLLANQPVDRCQSQDGAEAALQELERYLETLPLHTLADRSAICC
QYESVLTTQLKDQVERVFQKQGSVQEMFEKRRISLKKLAAKQTRPVQPVAPRPEVKSPHS
SPNQQRKERRYSADNAICKKVHVESPLLNGTRHASLSEEEENLAVLRRHVMNELLETERA
YVEELLCVLEGYAAEMDNPAMAPLIPSTLLNKKDVLFGNMFEIYQFHKRTFLKELEAYTD
FPELVGRCFLERMTDLQIYEAYCQNKPRSESLWRQCSDCAFFQECQKKLAHKLGLDSYLL
KPVQRITKYQLLLKELLKYSKGCDGCDDLQKALSSILGILKAVNDSMHLIAITGYEGNLS
ELGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEGYEKA
PSYSFKHSLSMSAVGITENAKGDNKKFEVWCNSRDEVFIVQAPTPEIKTSWVNEICKVLT
QQLKACRDARQPKNLDSVSMSPTSSSSSISLSPFRSSGQKNQKKQDEKKAEPSPTSDANS
SSSPKHKDEPVTSPTTDRSSVAKKRFTLQGFSNLKSPKGSALSPEHGTKRHLVKSDPTPF
GFKGWSKTSLSVDASEENDGYSSSEDPMNSDPEDDGGKKLAPGKYTVVADCEKAGPQELS
VKSGDVVQLIREGEDGQWFVRNLRSSKEGWVAAANLLSLITESKSSQSLSSSDGSVSGNI
STSSSCSETYTSFSDIKP
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgggagagattgagagagcgtttgggaacacaaatgaggaggagagcgggatgaggcgg
gtgagattcttctccttagtggaggatatgaagacggcgagggaggaagaggagagcagg
cggagggacgagaggaagggtggaaaacgaggatttggaggagagaggcttgtcagcatt
tcgctggaggagatggagagctactacagatacgccctgtgctgtcggcagctgtataat
gacatcatgcatggggaagatggtcctctgtgtgccgcagaaatcggatctgaactccag
aaacagtttgccatcctgccagggggccgcgggataaacggccgccctatcatggtcttc
ccagagttccccgagttcagcgagctggaggaggaggagctccaaagcgtcctccgctac
ctcaccagcgtccccagcgttgccgcatcgggagtgggtttcatcctggtcatcgacaga
cgactggaccgatgggccgccgtcagggctaccctgctccgcatcgctggctcatttcca
gggaacttgcacttggttctggtgttgcgtcccactactttgttgcagcggactctgtca
gacttcctgttcaagttcaacagggacgagttcaaaatgaaggtggtgatgctgagttcg
gtgactgagctccatgcttatatcgacccaggacaactcaccacagagctgggaggcacg
caggagtaccaccacgagagctggatctctcaccgcactgcaatcgaggccttcgccctc
atggtgaagaccacggctcagactctgcaggcgttcggcactgagctcgcggagacagaa
ttaccaaacgacgctgaggccaccaccaacctgctgcacacacacacactgaagaaggac
acaatgaaggaggacctgcaggtggcgctgtctcaaggtggacgcctgttggactgcatc
aacgagcctctacagacagaccccgaatacagcatgacccatgatgagctggagaatttg
gagactgtgcagagactcctgggtcagctggacgagaccgagacagcgttcgacgatttc
tgggagcgccaccgcaccaagctggaacagtgtttgcagctgcgccattttgaacagcac
ttccgtgaagtgcgcgctcagcttgatgtgacctcagaaaggctgtcgggtttctccgag
gtcagcgtcagccccgcccacggcgagcacgtcctccgagagctcgccgggcacgaggac
aaggcctgtgacgtcctggaccgtgccctgtccctggcctgcgagggtgacaggctgata
gaaaactcgcactacgccgaggactccatcaggccgaagtgcagtgagctaagggaggtg
tgcgacgagatcagcgccaccctgaggtgcaagaagaatctgctgctcagggcgatggag
atgcaccactcattggagaaggcgtcacagtggtgtgaggagggcatcttcctattggcc
aaccagcccgttgaccgctgtcagtctcaggacggcgctgaagcggctctgcaagaactg
gagcggtacctggaaacgttgccgctgcacaccctcgccgaccgcagcgccatctgctgc
cagtatgaatcggtgctcaccactcagctcaaggaccaggtagagagagttttccagaag
cagggctctgtgcaggagatgttcgagaagagacgcatcagtttgaagaaactcgccgcc
aaacagacccgaccggtccagccagtggcaccgagacccgaagtcaagtcgccgcactcc
tcgcccaatcaacagagaaaagagaggagatactccgcagataatgccatctgcaaaaag
gttcatgtggagtctcctcttcttaatggcaccagacacgcttctctctcagaggaagaa
gaaaacctggcagtgcttcggcgtcacgtgatgaacgagctactggagacggagagagcg
tacgtggaggagctgctgtgtgtgctggagggctacgcagcagagatggacaaccccgcc
atggctcccctcatccccagcacgctgctcaacaagaaggacgtcctgtttgggaacatg
tttgaaatctaccagttccacaagaggacatttctaaaggaactggaagcgtacactgac
tttccagagctggtgggccgctgctttttagaacggatgacggacctgcagatctacgag
gcctactgccagaacaagcctcgctccgagagcttgtggagacagtgctccgactgtgcc
ttcttccaggagtgccagaagaagctggcacataaacttggtttggactcctacctcctt
aaacctgtccagagaatcaccaagtaccagctactacttaaggagttgttgaagtacagt
aaaggctgtgatggctgtgatgacctacagaaggcgctctcctctattctggggatcctg
aaagctgtgaatgattccatgcacctcatcgctatcacaggatatgagggtaacctctcg
gagctgggccgtctgctcatgcaaggctccttcagtgtgtggacggagcacaaaaaaggc
cacgccaaggtcaaggacctggcccgcttcaagcccatgcagcggcacctgttcctgcac
gagaaggccctgctcttctgcaagcggagggaggagaacggcgagggctacgagaaagcg
ccgtcctacagcttcaagcactcgctcagcatgagtgccgtgggaataacggagaacgct
aaaggagataataagaagtttgaagtttggtgcaactccagagacgaggtttttattgtg
caggctccaacgccagagattaaaacttcgtgggtgaacgagatctgcaaagttctgacc
cagcaactcaaagcgtgcagagacgccagacaaccgaagaacttagactctgtttctatg
agtcccaccagcagcagcagctccatctcactcagcccgttccgtagcagtggtcagaag
aaccagaagaagcaggatgagaaaaaagccgagccgagcccgacctccgatgcaaactcc
tcttcctcacccaaacacaaagatgaaccggtgaccagtccgaccactgacaggtcctcg
gtggctaaaaagcgttttactttacagggcttcagcaatctcaagagtccaaaaggctcg
gccctgagccccgaacacggcaccaaacgccacctggtcaagagcgaccccacgccgttt
gggttcaaaggctggagcaagacgtctctctcggtggacgcctcggaggagaacgacggc
tactccagcagcgaggaccccatgaactcggaccccgaggatgacggaggaaagaagctg
gccccaggaaagtacacggtggtagcagactgcgagaaggcgggacctcaggagctgtct
gtcaagagtggagatgtggtgcagctaatcagagagggagaggacggacagtggtttgtg
aggaaccttcgcagcagcaaggagggctgggtggcggcggcaaacctcctcagcctcatc
acagagtccaagtcgtcgcagtcgctcagcagctcagacggcagcgtctccggcaacatc
agcacttcttccagctgcagcgagacctacaccagcttctccgacatcaaaccctga
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integrated database retrieval system
