Hippoglossus hippoglossus (Atlantic halibut): 117776402
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Entry
117776402 CDS
T07778
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117776402 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117776402 (prpf31)
Spliceosome [BR:
hhip03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117776402 (prpf31)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
117776402
NCBI-ProteinID:
XP_034466171
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All DBs
Position
16:10127662..10133732
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AA seq
508 aa
AA seq
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MSLADELLADLEEAGDEGEEGLYPEEEERDSDGEATHGRTEGGLEDIPEEMEVDYSKAES
VASIAKLRNSKQFSEIVDKIDLYIGKQRMNSDVAGPVESDPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKTNETLQQILTNATIMVV
SVTASTTQGSQLTDDELRQLEEACDMALELNQSKHRIYDYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQCLPPDL
RRKAARLVSAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKESKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgacgagctcctggctgacctggaggaggccggagatgagggtgaagag
ggactgtacccagaggaagaagagagggatagtgatggagaggcgacccatggaaggaca
gagggaggactcgaagacatcccagaggagatggaggtggactacagtaaagcagagagt
gttgcgtccatcgccaagctccgcaacagcaaacagttttcagagatcgttgacaaaatt
gacttgtatattggaaagcagcgcatgaattccgatgtcgcaggtccagttgaatccgac
ccagaatacaggctgattgtagcagccaataacctcacagtagagatcgacaatgagctc
aatatcattcacaagtttacaagggacaaatattccaagaggtttccggagcttgagtcg
ctggttccggattctttagattacattcgcacagtcaaggaactggggaacaatctggag
aaatgcaaaaccaatgaaactttgcagcaaatcctgaccaatgccactattatggtcgtc
agtgtcacagcctcaaccacacaggggtcacagctaactgatgatgagctgaggcagctg
gaggaggcatgtgatatggccctggagctgaaccagtctaaacacaggatatatgattat
gtcgagtccagaatgtccttcattgccccaaatctgtccatcattgtcggagcgtcaaca
gctgcgaagatcatgggtattgctggcggccttactaatctctcaaagatgccggcctgt
aatctgatgctgctgggagctcagaggagaaccctgtctggcttcagcagcacgtcactg
cttccccacaccggctttatctaccactgtgatgttgtacagtgcctaccaccagacctc
aggaggaaggcggctcgtctggtgtctgcaaagtgcacgctggcttcccgagtggacagt
ttccacgagagctcagacggcaaggttggctatgatctaaaagaagagatagagagaaag
tttgataaatggcaggaaccaccaccagtgaagcaggtcaaaccgctgccggctcctctg
gatggacagaggaagaagagaggaggaaggaggtatcgcaagatgaaggagcgtctcgga
ctgactgagatcaggaagcacgccaacaggatgaccttcgcagagattgaagatgatgcc
tatcaagaggatctgggcttcagtctgggtcagctggggaagagcggcagcgggcgcgtc
aggcaggctcaggttaacgatgccaccaaggccagaatctccaaatccctccagaggaca
ttgcagaagcagagcatgacctacggaggaaagtcgacagtcagagatcgctcgtcagga
accagctccagtgtagcgttcactcctctacaggggctggagattgtgaacccacaggct
gcagagaagaaggtggctgaagccaaccagaaatatttctccaatatggcagagttcctg
aaagtcaagaaggagtcaaagatgtga
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