Hippoglossus hippoglossus (Atlantic halibut): 117776434
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Entry
117776434 CDS
T07778
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117776434 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117776434 (trip13)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117776434 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_25
Viral_helicase1
AAA_14
KAP_NTPase
AAA_24
TIP49
NPHP3_N
AAA_5
AAA_28
AAA_33
AAA_17
AAA_7
TsaE
Cytidylate_kin
RNA_helicase
NACHT
ATPase_2
RuvB_N
AAA_30
ABC_tran
AAA_11
ATPase
bpMoxR
SLFN-g3_helicase
IstB_IS21
DUF815
AAA_19
Zot
DUF6393
Rad17
Mg_chelatase
PduV-EutP
nSTAND1
Sigma54_activat
PhoH
NB-ARC
AAA_3
NTPase_1
DUF7049
Motif
Other DBs
NCBI-GeneID:
117776434
NCBI-ProteinID:
XP_034466239
LinkDB
All DBs
Position
16:13845209..13852084
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AA seq
423 aa
AA seq
DB search
MEADRMEVASQKQDIHVEVHVRSDSTAKLSEVKMHVLALLNRHSIVFGNYRWTEFDEDFL
RKHVESVSIVDIEEMATQPLDLTSCSVSVHVFILNEDGPSTLSLEEDEELSAANHWLLPA
AEFHGIWESLVYDSGVKTQLLDYVTTTIYFSDKNVNSNLISWNRVVLLHGPPGTGKTSLC
KALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDALVFV
LIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEKIDLAF
VDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLFTMFELETMGFAKSEVSEH
SLNLRNLALKSKGLSGRALRKLPFLAHALFVRSPTVTLERFLEAMDRAVDKQMEEKANLV
NGF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacaggatggaggtggcgagccagaaacaagacatccatgtggaggtccat
gttagatctgacagcacagctaaactgtctgaggtgaagatgcatgttctggctctactg
aatcgccacagcatagtttttggaaactacagatggacggagtttgatgaagactttctc
aggaaacatgtggagtctgtgtctatagttgatatcgaggagatggcaacacagcccctt
gatctgacaagctgctctgtctctgttcacgtcttcattctgaatgaggatggacccagc
acgctcagtttggaagaagatgaagagctttcagcagccaatcactggctgttgcctgca
gctgaattccatgggatttgggagagcctggtgtatgacagtggagtcaaaacccagctc
ctggattatgtcacaacaacaatttacttctcagacaaaaatgtcaatagcaacctgatt
tcatggaaccgcgttgttctgctccacggacccccgggcacagggaaaacgtcactgtgc
aaagctcttgcccagaagctgtcaatcagactgtccagtcggtattcttacggccaattt
gtcgagataaacagccacagtttattctcaaagtggttctcagagagcggcaagctggtc
acaaagatgtttcaaaagatccaacaactgatcgatgacaaagacgctctggtgtttgtt
ctgattgatgaggtggagagtttgacagcagcaaggaacgccagccaggctggaaccgag
ccctctgacgccattcgagtggtcaactctgtcctcactcagctggaccagatcaagcga
cattcgaacgttgtgatcttgacgacctccaacgtgacagaaaagattgacttggcgttt
gtggacagagctgacatcaagcagtacattggacccccgtccgagaagggcatctacaac
atctacctctcctgcctcgaagagctgatgaagtgccagatcatctacccccggcagcag
ctgtttaccatgtttgagctggagaccatggggtttgctaagagcgaggtgtctgaacac
agcctgaacctgaggaacttggctctaaaaagcaaaggtttgagcggaagagcactcagg
aagttaccgtttctggcccatgcactgtttgtgaggtcaccgacagtgactctcgagagg
tttctagaggctatggaccgagcggtggataaacagatggaggaaaaagctaatctggtc
aatggtttctga
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