Hippoglossus hippoglossus (Atlantic halibut): 117776455
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Entry
117776455 CDS
T07778
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117776455
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117776455
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117776455
NCBI-ProteinID:
XP_034466276
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All DBs
Position
2:5865343..5879161
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AA seq
968 aa
AA seq
DB search
MGQKDHVEAGAGHMLDLEPDLEYLHVAGADRQAGGADGAPAMEEQGESSGSSSTADSPPP
ATVEESAGPDAECEPASSSSSTLAAGPDPDGGEGASTHTKNTHQPLCRTQCVDLGTEGPP
EPPSELSPEREHETPAQSPPNSPCKNPPEPRPSPSKSRPASEAGGKEYQAKLEFALKLGY
SEETVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAASLASTSSSSSSSSSCGCSDLL
DSQRSDSPCLSDSLCDQDNLRPIVLDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDI
TVFVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYE
SDGIIVSNDNYRDLANERPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKR
PIMPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTAKNQGDAGL
VKSHSVPAGSIEAKKGATKRQSDPSIRALSYSDAEEKLLAKGRAESHKSILCGGSSSSSS
GSGSITMSPAPGGPPSSLNLPQDHQSRAVTPHSLLPAPSHDLYPHCESPDLSYYSVTRAY
SGLSLSSRRSPDCRFPNDTDLRLGSFGSAGSAGSECGSESSTSCGSSCDSYSERPCPGCP
PDTLLEDNIHFANPHSRLYPHHAATNHELCGLHPADYTNIPHSHASNTSIHSYHLTRGQS
CAHDQQPSEAPPKRPLYPLPPHLQHQPLVARSSCPGDYHSLPQPNPHPPGSPLGRCLAPT
RAESVSDSHLYEHLSTSHHHHRPKALPSWDTYYRQPLPPSRYEPSAYQSLPDTRQSSWHT
PPWAQDGYAQHHSSHPALHPSPTHYHNHPPAPAHSPHPPHPSSSPLPPYAPHSAHLTVPS
HAPPSYMPQHSESSAHSCYGDVREKVFINLCNIFPSELVSRVMARSPHVTDPQQLAAAIL
AEKAQTGY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaggaccatgtggaggcaggggcaggccacatgctcgacctggagccggat
ctggagtatctccacgtagctggggccgaccggcaggctggcggcgctgacggagcccct
gctatggaggagcagggggagagctccggtagcagcagcaccgccgattcccctccgccg
gccacagtggaggaaagtgctgggcctgacgctgagtgcgagccggcgtcatcttccagc
tccacccttgctgccggccctgacccggatggaggagagggagcatcaactcacactaag
aacacccaccagccactttgtcgtacgcagtgtgtggacttaggcaccgaggggcctccc
gagcccccatctgaactctcaccagagcgggaacatgaaactcctgcgcagtccccaccc
aactccccgtgtaagaacccccccgagcctcggcccagtccctccaaatcaaggccggcg
tccgaggctggcgggaaggagtaccaggctaagctggagtttgccctgaagctgggttat
tctgaggagacggtgcgactggtgctgtccaagctgggccctgacaccctcatcaacgac
atactgggagagctggtcaaactgggcaccaagtcggacagcgagcagccggccgcatcg
ttggcctccacctcatcctcttcatcctcctcttcatcgtgcggttgctctgatttgctg
gacagccagaggtcggactcgccctgtctctcagactctctgtgcgaccaggacaacctg
cggccgattgtgctggacggaagcaatgtcgccatgagtcatggcaacaaggaagtgttt
tcgtgccagggcatccagctggcagtggattggttcctcgagcgtggccatcatgacatc
acagtgtttgtgcccgcatggaggaaggagcagtcccggcccgatgcccctataacagat
caggagatcttgcgtcgcctggagaaagaaaagattctggtcttcactccctcgcggcgc
gtccaaggccggcgcgtggtctgctatgacgaccgcttcattgtcaagctggcgtatgag
tcagacggcatcatcgtctccaacgacaactaccgggacctggctaacgagaggcccgag
tggaagaagttcatcgacgagcggctgctcatgtactccttcgtcaatgacaagttcatg
cccccagacgaccctcttggccgtcatggcccctccttagacaacttcctgaggaagaga
cccatcatgcctgagcagaagaaacagccttgtccatatggaaaaaagtgcacttatggc
cacaagtgtaagtactaccacccggagcgaggtgcgcagcctcagcgcgctgtggctgac
gagctgcgagccagcgccaagacctgcgtcaccgcgaagaaccagggtgacgctgggctg
gtgaagagccacagtgtgccagctggcagcattgaggcaaagaaaggggccacgaagagg
cagtcggaccccagcatccgagctctgtcgtacagcgacgctgaggagaagctgctggca
aaagggagggcggagagccacaagagcattttgtgtggtggcagcagtagcagttccagc
ggcagtgggagtatcaccatgtccccggccccggggggccctccatccagccttaacctc
ccccaggaccaccagtccagagcagtcactcctcacagtctcctcccagcccccagccac
gacctctaccctcactgtgagtcccccgacctgagctactactcagtaacgcgtgcctac
tccggcctgagcctgtcctccagacggagcccagactgtcgcttccccaacgacacagac
ctgcggctgggctcgttcggctccgcgggctccgcgggctccgagtgcggcagcgagagt
agcacgagttgcggcagcagctgcgactcgtacagcgagaggccgtgccctggctgcccc
ccagacaccttactggaagacaacatccatttcgcaaacccccacagccgcctgtatccc
catcacgctgcaaccaaccatgaactttgtggtctccacccggccgattacacaaatatc
ccacacagccacgcgagtaacaccagcattcacagttaccacctgacacgtgggcagagc
tgtgctcatgatcaacagccgtcagaggctccgccgaagcgtcctctctaccccttaccc
ccccatctccagcaccagccgctggtcgcacgctccagctgcccgggcgactaccactct
ctgccgcagcccaaccctcacccccctggctctcctcttggccgctgcctagcccccacg
cgagcagagagtgtgtcagactcacatctgtacgagcacctctccacgtcgcaccatcac
caccgaccgaaagcgctgcccagctgggacacgtactacagacagccactgccgccgtcc
agatacgagccgtcagcctatcagagcctcccagacacacggcagtcctcctggcacacc
cctccctgggcgcaggacgggtacgcccagcaccactcctctcacccagctctccacccg
tccccgacacattaccataaccacccgccagctcccgcccactcccctcacccgcctcat
ccatccagctcccctcttccaccctacgctccgcacagcgctcacctgacggtgccctcc
cacgctcctccctcctacatgccacagcactcggagtcctcggcgcacagctgctacggg
gacgtgagggagaaagtgttcatcaacctgtgcaacatctttccctcggagctggtcagc
cgggtgatggccaggagcccccacgtcacagacccccagcagctggcggccgccattctg
gcagagaaggcccagacgggctactga
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