Hippoglossus hippoglossus (Atlantic halibut): 117776464
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Entry
117776464 CDS
T07778
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117776464 (wdtc1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117776464 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_19
TPR_2
Beta-prop_HPS5
Beta-prop_IFT122_1st
ANAPC3
TPR_1
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
TPR_16
Beta-prop_WDR19_1st
Beta-prop_SPT8
TPR_17
TPR_6
TPR_9
Barstar
Motif
Other DBs
NCBI-GeneID:
117776464
NCBI-ProteinID:
XP_034466290
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Position
16:complement(14825595..14834039)
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AA seq
671 aa
AA seq
DB search
MTTVNITRDILHRQIRDKRASSFQRSYHVTDPFIKRLGLEAELQGHTGCVNCLEWNERGD
LLASGSDDQHAIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILITGAADTKVHVHD
VTAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRENSKRSDVLIDLTEF
CGQLVEAKCLAVNPRDNNYMAVGANGPFVRLYDIRMIHNYRKSMSQSTSAAVHTFCDRQK
PIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFLIPKKCQSTTGDVQNGKTTNGVSNGIHLPTSHIRFAANKIRSSSSELPPHLEKI
KQQANDAFAQQQWTQAIQLYSLSIHEASCNAMLYGNRAAAYMKRKWDGDHYDALRDCLKA
LTLNPGHLKAHFRLARCLFELKYVTEALECLDDFKGKFPEQAQSSACDALDKDIKAALFS
KTESAAEDKKSNSSIRFHSYSRKESIPEDELVLRERSFDYKHRYCGHCNTTTDIKEANFF
GSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSHCFLATSGIDPVVRL
WSPRPETETENGRVVEDMESAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPEGSDDED
SSEGQVQCRPS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtcaacattaccagagatatcctgcacaggcagatcagggacaagagggcg
tccagcttccaaaggtcctatcatgtgaccgaccccttcatcaagagactcgggctggaa
gctgagcttcagggtcacacaggctgtgtgaactgtttggagtggaatgaacgaggagat
ctactggcctcgggctcagatgatcaacatgccatcatttgggatccgttcaaacacaag
aagcttacaactatgcacacaggtcatgcagcaaatatattctctgtaaagttcctccct
cactccggggacagaattttgataacaggcgcggccgacacaaaggtccatgtgcacgac
gtgacagcgaaggaaaccatccacatgttttccgaccataccaacagagtcaaacgcatc
gccacggcacccatgtggcccaacaccttctggagtgctgcggaggacggcatcatcaga
cagtatgacctgcgggagaacagtaaacgctctgacgtgctgattgacctgacggagttc
tgtggtcagctggtggaggccaagtgtttggctgtcaacccacgggacaacaactatatg
gcagtgggagccaatggtccatttgtacgtctctatgacatcaggatgatacacaactac
aggaaatctatgagtcagagcacgtctgcagctgtgcacacattctgtgatcggcagaag
cccatcccagacggagccgggcagtattatgttgcaggacacctgccagtgaaactccca
gactacaataaccgcctgagggtcctggtggccacatatgtcaccttcagtccagatggc
acagagctgcttgtgaacatgggaggggagcaggtgtatctgtttgatttgacatttaaa
caaaggccgtacaccttcttgattccaaaaaagtgccagtcaacaactggagacgtgcag
aatggaaagacgaccaatggcgtctccaatggaattcacttgccaaccagccatattcgc
tttgccgctaacaagatccgctcaagttcttctgagctccctcctcacttggagaagata
aagcaacaagctaatgatgcatttgcacaacagcaatggacacaggccatccagctgtac
agtttaagcattcatgaggccagctgcaacgccatgctgtatgggaaccgggctgcagcc
tacatgaaacgaaaatgggatggagaccattacgacgccctcagagactgtctgaaggct
ctgactttaaaccccggccacctgaaagcccatttcagactggcacggtgtctgttcgag
ctgaagtatgtgactgaggctctggagtgtttggatgatttcaagggaaagtttccagag
caggcgcaaagtagtgcctgtgacgccttggataaagacatcaaggctgctctcttctct
aagacagaatcagcagctgaagataagaagtccaacagctccatacgattccactcgtac
agtaggaaagagtcgatccccgaagacgagctggtgctgagagagcgcagcttcgactac
aagcacagatactgtggtcactgcaacaccaccaccgacatcaaagaggccaacttcttt
ggaagcaaaggacagtacattgtcagtggctcagacgacggctccttctttatctgggaa
aaggagacaaccaatctggtgaggatcctccagggggacgagtccatagtcaactgcctg
cagccacaccccagccactgcttcctggccacaagtggtattgaccctgtggttcgatta
tggagccccagaccagagacggagactgagaacgggcgcgtggtggaggacatggaaagt
gctgctcaggcaaaccagcgacgtatgaacgccgatccactggaggttatgctgctcaac
atgggctatcgcatcacaggcctgcgtggcgttggcccagagggctcagacgatgaagac
agctcagagggacaagtgcagtgccggccgagctaa
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