Hippoglossus hippoglossus (Atlantic halibut): 117776472
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Entry
117776472 CDS
T07778
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117776472 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117776472 (snx27b)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Others
Others
117776472 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117776472 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
VirE3
PDZ_2
SNX17_FERM_C
USP7_C2
RA_3
Motif
Other DBs
NCBI-GeneID:
117776472
NCBI-ProteinID:
XP_034466312
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All DBs
Position
16:complement(10831421..10843266)
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AA seq
572 aa
AA seq
DB search
MADVEGQETCSSVPPLPLPSSRNGSDGGNVTPGTGDGSCQTATTVTPGPRLVRIVKSDSG
YGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGA
THKQVVDLIRAGERELVLAVLPVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPSYKH
TELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLRREFANFTFPKLPGKWPFSLSEQQL
DARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVR
KNSTTDQVYQAVVMKLGVDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPG
TCLTLRKWLFTTEEEILLNDNQLAVNYFFHQAVDDVKKGFIKAEQKSYQLQKLAEQKKMS
MYLSLLRGCEGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACSEEGTLENQVIAFDWG
EMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEAT
DKDNKNCSKDEYFPAAEAQKGWGHLGREIVTS
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggacaagaaacttgctcgtcggtccctccgttgcctctcccttcc
tcccggaacggctccgatggcggtaacgttacaccgggaaccggcgacggcagttgccag
acggcgaccaccgttaccccgggcccgcggctggtccggatagtgaagtccgactcgggc
tacggtttcaatgttcggggccaagttagtgaaggaggacaactgcggagcattaacggg
gaactgtacgctcctctgcagcatgtcagtgccgttctaccggggggagctgcagacaga
gccggtatctcgaagggggaccggatccttgaggttaatggagtgaatgtagagggagca
acccacaagcaggtggtggacctgatccgggccggggagagggagcttgtgctggccgtg
ctgcccgtcccgccccaggaggctgactgcttggatcccggagacgacggttcagctcag
tcctgctacgactactccgacaagcaggctgtccccatctctgtgcccagctacaagcac
actgagctgaaccaggaaaagtttgtggtgtataatgtgtacatggcaggcaggcagctg
tgctccaagcgttacagagagtttgtgatcctacaccaaaaccttaggcgggagtttgcc
aactttacattccctaagctgcctgggaagtggcccttttccctgtcagagcagcagctg
gatgcaagacgcagaggcctggaagaatatttggagaaagtgtgctctgtacgggtaatt
ggagaaagtgatatcatgcaggagttcctgtctgaatcagatgagaactataacggcgtg
tcggatgtggagttgagaatagccatgcccgataaaaccacgctcactgtcagagttcgc
aaaaattccaccacagatcaggtctatcaggctgtggtaatgaaactaggtgtggacagt
gtgacagccagctactttgctctctttgaggtcatcaatcacacattcgtgcgtaaactc
gccccaaatgagttcccccacaaactgtatgtacagaactatacctcagccattccagga
acctgtctcaccctgcgcaagtggctcttcaccacagaagaagagattctgctcaatgac
aaccagcttgctgtcaactatttctttcaccaggctgtagatgatgtgaagaaaggtttc
atcaaagcagagcagaaatcctatcagctgcaaaaactggcagagcagaagaagatgtcc
atgtatctgagtttgttgcggggttgtgagggctacaatgagatcatattcccccactgt
tcctgcgactcccggcgcaaaggccacgtcatcacagccatcagcattcaccacttcaag
ctgcacgcctgctccgaggaagggacactcgagaaccaagtgattgcattcgactggggg
gagatgcagaggtgggacaccgatgaagagggaatggccttctgctttgaatatgcacga
ggagaaaagaaaccacgctgggtcaagatatttacaccttattttaactacatgcacgaa
tgcttcgagagagtcttctgtgagctgaagtggaggaaggaggtggaagaggaggcgaca
gacaaggacaataagaactgcagtaaagatgaatattttccagcagctgaggcacagaag
ggatgggggcacctaggaagggagatcgttacctcttaa
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