Hippoglossus hippoglossus (Atlantic halibut): 117776539
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Entry
117776539 CDS
T07778
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03030
DNA replication
hhip03420
Nucleotide excision repair
hhip03430
Mismatch repair
hhip03440
Homologous recombination
hhip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117776539 (rpa2)
03420 Nucleotide excision repair
117776539 (rpa2)
03430 Mismatch repair
117776539 (rpa2)
03440 Homologous recombination
117776539 (rpa2)
03460 Fanconi anemia pathway
117776539 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhip03032
]
117776539 (rpa2)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117776539 (rpa2)
DNA replication proteins [BR:
hhip03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
117776539 (rpa2)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
117776539 (rpa2)
MMR (mismatch excision repair)
117776539 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
117776539 (rpa2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
TAD2
Motif
Other DBs
NCBI-GeneID:
117776539
NCBI-ProteinID:
XP_034466416
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All DBs
Position
16:7372341..7378523
Genome browser
AA seq
296 aa
AA seq
DB search
MLSSLKKAKIRRRFRTGLRGGYSESSVGGGYTQSPGGFASPSMSQGGDKKGRTRANQIIP
CTVSQLMSASQAEESFRVGDVEVAQVTFVGVIRSTDKSMTNIQYKVDDMTGAPMDVKQWV
DTEDPGVDSTVLPPGTYVKVSGNLRSFQNNRSVVAFSVRPLEDMNEITSHMLEVVQAHMA
LSKPQSTKSAGGGMSSNVPPMMRTDMGNKGTMGGMGGSYAGATDMTKNGLSGNQNQVLSL
IRSCPEPQGISIQDLKQRLSGISLTVIKQAVEFLSNEGHIFSTIDEDHFKSTDSDD
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctctttgaagaaagcaaagatccgacggaggtttaggacaggtttgagagga
ggttacagtgagtccagtgtgggcggaggttacactcagtccccgggaggcttcgcatca
ccttctatgtcccaggggggagacaagaaagggagaactcgtgcaaatcagataatcccc
tgcacagtgtctcagctgatgtctgcttcccaggcagaggaatcgttcagagtgggagat
gtggaagttgcccaggttaccttcgtgggtgtcatcaggagcacggacaaatccatgacc
aacatccagtacaaggtcgacgacatgacgggcgctcccatggacgtgaagcagtgggtc
gacacagaggatcctggtgtggacagcacggtgctgcccccgggcacgtacgtcaaagtt
tctggaaatctgcgctcctttcagaacaacaggtctgttgtggcgttcagcgtcagaccc
ctagaggacatgaatgaaatcacatcgcacatgttggaggttgtccaagcacacatggcg
ctcagcaaacctcagagcacgaagagtgccggaggaggaatgagcagtaacgtcccaccc
atgatgaggacggacatgggcaacaaggggaccatgggaggaatgggcgggagctacgct
ggtgctaccgacatgactaagaacgggttgagcgggaaccagaatcaggtgctgagtttg
ataagaagctgcccagagccgcagggcatcagcatccaggacctgaagcagcgactcagt
ggtataagcctgactgttatcaagcaagcagtggaatttcttagcaacgaaggtcacatc
ttttccaccatcgatgaagaccatttcaaatcgacagacagtgacgattag
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