Hippoglossus hippoglossus (Atlantic halibut): 117776578
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Entry
117776578 CDS
T07778
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117776578
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117776578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
117776578
NCBI-ProteinID:
XP_034466516
LinkDB
All DBs
Position
16:complement(839906..868563)
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AA seq
1512 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGPWRPLDEDGKTSSPYSSSSTTSSSPARAVEPVTDLAVI
AKGLGEEVPEGFTCIDRTLGGHSAELSAGLINNPHLYLCYRRGREKPPILDLGVLYEGKD
PLKQGWYVIETTPYSRSANLSSGGAPTAHRVFLMYRRALDSQGLHTLGVTDIALLLPSKG
EVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYEATLISRYPEEDLEAFPLPES
VPVFCLPMGVTVESWPLNTKYQLPIFSTFVLTSASGDKVYGAAIQFYESFPRELLSERQS
VRLGLLSVVDRRPITNRSLQAKKSICVLSHWPFFTIFQKFLTFIYRYSISGPHVLPLEKH
ISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASYLKLLQNLGPENACTL
LLAVLTEHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPMPFIV
GVHSSYFDLYDPPTDVVCVDLDTNTIFQSDDKKPLSWRSLPRKHGKTLFNALTSLHKTLE
KICTPGQEEATLEFLLTDYDQIYRRQKQLELEIQEVFLRFMSCLLRGYRSFLLPITQAPS
DTTTDCSSLFNLQGFLKSRDRTQQKIYSQLTRTQMFTQFIEECSFVSDRHACLEFFDECV
QKVDVEKPEEVRLIDMDETYSGEHTVFIMPPEEPQEPDGSECPALYSYETFPTLRPELFD
QPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYSAVPDMWSKCLLGHCYGLWFLYL
PTFVRAESAKVRALHTAYDVLKHMENRKVVVPDEVCYRILMQLCGQYGQPVLAVRVLLEM
KKAGITPNTITYGYYNKAVLESKWPSTSQGGRLRWAKLRNVLLAVAQFRQPIKRRQKSGS
VGSRGEMMVDADQRPRPHSNLIRQSSWSGLSESSSHESLTGPMVKSNSLNSMSASSDKVK
HCKKAVLPDAGTAGCGDAVSRKPPLGLRDASAPPAAPPSGVVVVPRSQVCLSNFYKECAE
SADSEPDCSCHPAERDGRPVGVRDSSGRKEAVDENYNNVSSPNRGGLAGKLQQLLTPTRH
RVSVRRAASVDDRRPGGGIGRRVSEQRQSRKAQVAETLLKAKDRLVNATSESSLSVGSDL
DLTDTPTPAFPIRRSWDANQEAAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNS
SCPFCGATFVPFLNAEICDLGLISSAERSNWNLEDEVESSARPPSGQDFSLRHQCNGLSE
ESSSETSSYSENSRTTTASSVGGAPQVTVAYLSPLVLRKELESLLENEGEAVLAQPQFLD
SHSIIFWNLVWYFQRLGLPCNLLQLVRASPLVSSFTQSESSAVSVRLLWDTLSPDTDQWP
PLYILWRIHSGVPMRSYSWRRHNHPFTLAFLEEVLRWVGMNEVHKAVTLFLDTMAKQPAS
TRIQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLSGTLGREELRKKRAQPLSPKAV
DCRRSFHPPLEC
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccgcagctggtggactacttcgtagtggcaggtctcgaccct
gcagggccctggaggcccctggatgaggatgggaagacctcctccccctactcttcctcc
tccaccacctcgtcttctccggcccgggcggtggagccggtcacagatctggcggttatt
gccaaagggctcggggaggaagtgccggagggcttcacctgcatcgacaggacgctgggc
ggacattcggccgagctgagcgccggactgatcaacaacccgcacctgtacctgtgttac
cgccgaggacgagaaaaaccgcccattctggacctgggggttctgtacgaggggaaggat
ccgctgaagcagggctggtacgtcatcgagacgacgccctacagccgctcggccaacctg
agctctggcggcgccccgacggctcaccgggtgttcctgatgtatcggcgggctctggac
tcgcaggggctccacacgctgggcgtcaccgacatcgccctgctgctgcccagcaagggg
gaggtggccccgcacactttctgccgcgtcgataagaacctgaacaccggcatgtggggt
ccggccctgtacgtgtgctataagagggctgtggccaaagccaacgcgctggtctacgaa
gccactctgatcagccgctacccggaggaagacctggaagcgtttcctctgccggagtcg
gtgccggtcttctgtttgccgatgggcgtcaccgtggagagctggcctctgaacacaaag
taccagctgcccatcttctccaccttcgtcctcacgtccgcctccggggacaaggtttac
ggagcagccatccagttctacgagtccttccccagggagctgctgtcggagcggcagagc
gtgaggctcggcctgctcagcgtggtcgaccggcggccgatcaccaaccgcagcctgcag
gcgaagaagagcatctgcgtcttatcccactggcccttcttcaccatcttccagaagttc
ctcaccttcatctacagatactccatctccgggccgcacgtcctgcctctcgaaaaacac
atctccagcttcatgcacaacgtcccgttcccgtccccccagcggcctcgtatcctcgtt
cagctctctccgtacgacaacctgctgctctgccagccggtctcatctccgctcccactc
agtggggcgagttacctgaagctgctgcagaacctgggtccagaaaacgcctgcacgctg
ctgctcgccgtcctcaccgaacacaaactgctgctgcactcgctgcgcccggacgtcctc
acctccgtcagcgaggccctcgtctcgatgagtttccctctgcgctggctctgtccctac
atccctctgtgtccactgcagatggccgatgtgctgctggcgccgatgcccttcatcgtg
ggcgtccactccagctacttcgacctgtacgacccccccacggacgtggtgtgtgtcgac
ctggacaccaacaccatcttccagtcagatgataagaagccgctgtcgtggcgctcgtta
cccaggaagcacggaaagactctgttcaacgcgctcaccagcctccacaagaccctggag
aagatttgcacccccggccaggaggaggccacgttggagttcctgctgaccgactacgat
cagatctacaggcgtcagaagcagctggagctggagatccaggaagtgtttctgcgtttc
atgagctgcctgctgcgaggataccgctccttcctgctgccgatcacacaggctccgtcc
gacaccaccaccgactgcagttccctcttcaacctgcagggcttcctgaagtctcgggat
cggacgcagcagaagatttacagccagctgacgaggacgcagatgttcactcagttcatc
gaggagtgctccttcgtcagtgaccgtcacgcctgcctggagttcttcgacgagtgcgtc
caaaaggtggatgtggagaagccggaggaggtgaggctgatcgatatggacgagacttac
agtggagaacacacagtcttcatcatgcctcctgaagaaccacaggaaccggacgggtca
gagtgtcctgccctctacagctatgaaaccttccccacgctgaggccggagctcttcgac
cagccgcaggaccagctccgtgtcccagctaaaggcagcgcccccagcagccccgcccct
cgacgcacaaaacaggagattaaactggctcagaagcgagctcagaaatactcggcggtc
cccgacatgtggtccaagtgtctgctgggtcactgttacggcctctggttcctctacctg
cccaccttcgttcgggcggagagtgccaaggtccgcgccctgcacacggcctacgacgtc
ctcaaacacatggaaaaccgcaaagtggtggtgccggacgaggtgtgttaccgcatcctg
atgcagttgtgtggtcagtacgggcagccggtcctagctgttcgagtcctgctggagatg
aagaaggcgggaatcacacccaacaccatcacctacggatactacaacaaggcagtgctg
gagagcaagtggccgtctaccagccagggcgggcgtctccgctgggccaagctgaggaac
gtcctgctggctgtggcccagttcaggcagccaatcaaacggcggcagaagagcggctcg
gtggggtcacggggagaaatgatggtggacgcagaccagaggccccgcccccactccaat
ctgattcgtcagtccagttggagcggtctgtctgaaagctccagtcacgagtctctaact
ggtccaatggtgaagagcaacagtctgaacagcatgagtgcgtcgtccgacaaggtcaaa
cactgtaagaaggccgtcctccctgacgcagggactgccggctgcggtgacgccgtctct
cgaaaacctcccctgggactaagagacgcgtccgccccgcctgcagcgccccctagcggt
gttgtagtggtgccgcggagtcaggtctgcctctccaacttctacaaagagtgcgcagag
tcggccgactcggagccggactgcagctgtcatcctgcggagagagacggcaggcctgta
ggggtgcgtgactcgtccggcaggaaagaggctgtggatgagaactacaacaacgtctct
tccccgaaccgcggaggtctagcaggaaaactccagcagctcctcaccccgaccagacac
cgagtgtcggtgcgacgagccgccagcgtggacgaccggcggcctggaggagggatagga
cgaagagtgtcggagcagaggcagtcaaggaaagctcaggtggctgaaacgctgctgaag
gccaaagacaggctggtgaacgctacgtcagagagttcgttgtctgtaggaagtgacctc
gacttgacggacacgcccactccagcgtttcctatacgcaggtcctgggacgccaatcag
gaggcggcggggctggaggtgttgatgtccagctgctctctgtgtcgcagctgtaactca
ttggtttatgacgaggagatcatggcgggctggacgtctgacgactcaaacctgaactcg
tcgtgtccgttctgcggcgccaccttcgtcccgttcctgaacgccgagatctgcgacctc
gggctgatcagcagtgcggagcgcagcaactggaacctggaggacgaggtggagagctcg
gcgaggccccccagtggtcaggacttctccctgcgccaccagtgtaacggtctgagcgag
gaatcgagctctgagaccagcagctactcggagaacagcagaaccaccacggcttcgtca
gtgggtggggctcctcaggtgacggtggcgtacctgagccctctggttctgaggaaggag
ctggagagtctgctggagaacgagggcgaggcggtgctggctcagcctcagttcctcgac
agtcactccatcatcttctggaacctggtctggtacttccagcgcctcggcctcccctgt
aacctgctgcagctcgtcagagcctcgccgctcgtcagcagcttcacacagtcggagagc
tcggcagtgagtgtgaggctcctgtgggacaccctgagccccgacacagaccagtggccc
cccctctacatcctctggaggatccacagtggcgtcccgatgagaagctacagctggcgg
agacacaaccacccgttcaccctggccttcctggaggaggtgctgcgctgggtcggcatg
aacgaggtgcacaaagccgtaacgctcttcctggacacgatggccaaacagccggcgtca
accagaatacagaggagcttgtacagagagttcctcttcctcacgctggcagctatgggc
aaagatcacgtcgctgcgttcgataagaagtacaaggcggcgtactcgcggctcagcggc
actctgggccgtgaggagctcagaaagaagcgagcacagccgctcagccccaaagccgtt
gactgcagacgtagcttccacccgcctctcgaatgctga
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