Hippoglossus hippoglossus (Atlantic halibut): 117776620
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Entry
117776620 CDS
T07778
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117776620 (rnf115)
04121 Ubiquitin system [BR:
hhip04121
]
117776620 (rnf115)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117776620 (rnf115)
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117776620 (rnf115)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117776620 (rnf115)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
C1_2
zf-RING-like
zf-C3HC4_3
Rad50_zn_hook
HypA
Motif
Other DBs
NCBI-GeneID:
117776620
NCBI-ProteinID:
XP_034466614
LinkDB
All DBs
Position
16:10651983..10659071
Genome browser
AA seq
315 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGANGIDDTAT
QFAELWHLLLLERPFTTDNDTPDSEPRLPGGRLGGLSDLGGLGGGPIGGSVPAGLGGPMG
GLLGAGDHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVSSSPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVNISQEQADCC
MECPVCKEDFTVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSLNGEDSSSQPPSES
PSLSMDPRTQERWSF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcgatttttctgccactgttgtaaaggagaa
gtcaatcccaaactgccggagtacatctgtccgagatgtgattcagggttcatagaggaa
gtaacagaagactccagtctcctagagggtggtgcaaacgggatagatgacacagccaca
cagtttgcagagctatggcacctgttgttactggagcggccatttacaacagacaatgac
acccctgactcagaacctcggctccctggaggacggctgggaggtctcagtgacctgggg
gggttgggagggggaccaatcggggggtcagtcccagcaggccttgggggacctatgggg
ggtctactaggagccggggatcactggggaccgggacgcccacctcgcctgcacagccag
agaagataccggtctagaggcagcagcaggcctgaccgctcgcccgctgtggaagggatt
gtgcaacagtttcttgctggcctctttgccaactctggagtctccagctcacctccgctc
tcatggacagggatgctgcactctaaccctggggactacgcctggggacagggagggtta
gacgctgtgataacacaactactaggtcagctggaaaacacaggacctcctccagcagag
aaagagaagatctcttctctcccgactgtcaatatatctcaggaacaagcagactgctgt
atggaatgtccagtgtgcaaagaggacttcacagttggagagccagtcagacagttaccc
tgtaaccacttctttcattcagactgtatagtgccatggctggaaatgcatgacacatgt
ccagtgtgtaggaagagtttgaacggtgaagacagcagcagccagcccccatcagagtcc
ccctccctctccatggaccctcgcacacaggagagatggtccttctga
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