Hippoglossus hippoglossus (Atlantic halibut): 117776646
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Entry
117776646 CDS
T07778
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117776646 (lingo4b)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117776646 (lingo4b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRR_9
ig
Ig_2
V-set
LRR_Zer-1
Ig_5
C2-set_2
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
117776646
NCBI-ProteinID:
XP_034466660
LinkDB
All DBs
Position
16:complement(2008317..2025160)
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AA seq
603 aa
AA seq
DB search
MFVESVVRWGAWSVLLQFGLGVAAGVCPSRCVCRPEAREVICAGKHFSSVPEGFSGDARR
LDISHNKIKTVGRRQFSGLLQLQELDLSDNIISMIEVEAFQGLQNLRTLRIKNNRLKILP
VGVFSGLSGLRLLDLSQNEILVFLDYTFREMMSLQTLEAGENDLVFISQRAFVGLQNLQE
LNLDRSNLTSIPTEALSQLQSLARLRMLRLTITTLPNNAFRRLHRLRSLLIANWPALDSI
ASNSLIGLNLTSLVISSCNISAVPYSALRHLVYLRYLDLSYNPITAIQGNLLGDLLRLQE
LHLAGGSLLRIEPGAFRGLAYFRMLNVTSNQLTSLEESVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPACSSPDSVRQREFRDFSEKELPRLFTCRPARIMDRRPQEAR
VEEGTTVLFSCKADGDPFPSITWISSHKNLVSATGRIRVLPNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPFFSEEGWVEPSNPQAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGEGGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcagtcgtccggtggggggcgtggagcgtcctgctccagttcggactg
ggtgtagctgcaggagtgtgtccgtcccgctgcgtgtgtcgacccgaggccagagaagtg
atctgcgctggcaaacatttcagttcggtgccagagggtttttccggtgacgccaggcgt
ttggacatctcccacaataagattaagacagtgggacgccgccagttctctggactcctg
caacttcaagagttggacctcagcgataacataatctccatgattgaggtagaggctttc
cagggcctgcagaatctcaggacgcttcggattaagaataaccgactgaagatcctcccg
gtcggggtgttctctggcctgtccggcctgcgccttctagacttaagccagaatgagatt
ctggtcttcctggactataccttcagagaaatgatgagcctgcaaacgctggaggccgga
gagaacgacttagtgttcatctcgcagcgggcgttcgttggtctccagaatctgcaggag
ctcaacttagatcgcagcaatctgacgtctattcccactgaggcgctgtcgcagctccag
agcctggctcgtcttcgaatgctgcgcctgaccatcaccacacttcccaacaacgccttc
agacgactccaccgtctgcgcagcctcctgatagcaaactggccagccctggactcgata
gctagcaacagcctgattggtctcaatttgacctcgctcgtcatcagcagctgcaacatc
agcgctgttccttactcagcgctccgtcacctggtctacctgcgctacctggacctgtcc
tacaaccccatcactgctatccaagggaatctgctcggggacctcctgagactccaggag
ctacacctggccggggggagcctgctacgaatagagcccggggccttcaggggcctggcc
tacttccgcatgctcaatgtgacgtccaatcagctcaccagtttggaggagagtgtcttc
cactccgtggggaaccttcaggtgctgcggttggatgggaatcccctagcatgtgactgc
cgccttctgtgggtggtccgtcgcagattacgcttgaactttgacggacatcagcccgct
tgttcctccccggattcggtgcggcagcgtgaattcagagacttctcggagaaggagctc
ccgcggctgtttacctgccgtcctgctcgcatcatggaccgcaggccgcaggaggcccga
gtggaggagggcacgaccgttctcttctcctgcaaagctgacggggatccgttcccatcc
atcacctggatctcctcccacaagaatttggtttctgcaacaggaaggatcagagttttg
cccaacggcactctagaagtgcgttttgcccaagtacaggacagtggtacgtatcagtgc
ctggccggcaacgcggccggcaacgacagcctgaccgtcggcctctacgtgaagggcctc
ccccggaaccgaaccatccctttcttctcagaggagggctgggtggagccttcgaatcca
caagctgccaactcctcggctcaaatggcgaagccgtacccgttcgacgcgaagacgctg
atcatcgccaccaccatgggcttcctgtcgttcctcagctccgtggccatttgcttcgtc
ttcatgttcttctggagccagagcaaagggcagatcaaacacacggcaactattgacttt
gttccgcggtcttccatgggcggaggaggggagggaggtgatggtggcaggttcaccatg
aagcttatttaa
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