Hippoglossus hippoglossus (Atlantic halibut): 117776658
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Entry
117776658 CDS
T07778
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117776658 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hhip03310
]
117776658 (rorc)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117776658 (rorc)
Nuclear receptors [BR:
hhip03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117776658 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117776658
NCBI-ProteinID:
XP_034466681
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Position
16:complement(11315521..11333158)
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AA seq
530 aa
AA seq
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MYSNACADLSARNNQQAVKCFHRGVMEYEDPDVPPADTPIKRGGALSKKTHLTQIEAIPC
KICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKC
LAQGMSRDAVKFGRMSKRQRDSLIAEVEKHRQQQLHQQQLQGDVQSVLSFPTKARQDRSP
QLLQPMAPAYSVTGEAELLSYTNNVHPYLVYSANESQVSGMIYRSSGVSPTPRSQGRGGQ
NGHPDIRGFDLRQQSHDLTAIHPYNPLEESYSIYPHSLRNIDELCASIVRSHRETSQFRV
EELQALRWKLFSREEIQAYQSKSVDEMWQHCAIRLTDAVQYVVEFAKHIPGFRMLSQNDQ
IALLKTGSMEVVLVRMCRFFNTENNTVFFDGKFAGVEVFKSLACGDLITAVFDFAHDMCA
LKLTEQQIALFSALVLINADRPCLEDRGRVQRVQRSVELGLTHILHRDNLEGLLHKLYQR
MAVLRSLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFASEAELLPGTTH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaaatgcctgcgccgacctgagcgctagaaacaaccaacaggccgtgaagtgt
ttccacaggggagttatggaatatgaggatccagacgtgccccccgctgacacccctatc
aagagaggaggagccctgtccaagaagactcatttgacccagattgaagcgatcccgtgc
aagatctgcggcgacaagtcctctggcgtgcattatggagtcatcacctgcgagggctgc
aagggattcttcaggcgcagccagctgcccactgtgtcctattcctgctccaggcagagt
aactgtcagatcgaccgggccagtcgcaaccgctgccaacactgccgtctgcagaagtgc
ttggcacagggcatgagcagagatgccgtgaagtttggaaggatgtccaaacgtcagagg
gactctcttatcgccgaagtggagaagcaccggcagcagcagctgcatcagcagcagctt
cagggagacgtccagtctgtgttgtccttccccaccaaagccaggcaagaccgctccccc
cagctcctccagcccatggctccagcctactctgtcactggtgaggctgagctgctgtcc
tacaccaataatgttcacccttaccttgtgtactctgccaacgagtcgcaggtgtcaggg
atgatctacagaagctccggtgtctctcccacacccagatcccaggggagggggggccaa
aacggacaccctgacataagagggtttgacttgagacagcaatctcatgatctgacggcg
atccatccctacaaccctctggaggaatcctacagcatttatcctcactctctgagaaac
atagatgagctgtgtgccagtattgtgcgttcccaccgagagaccagccagttcagggtg
gaggagctgcaggctctcagatggaagctgttcagtagagaggagatccaagcctatcag
agcaaatcagtggacgagatgtggcagcattgtgccattcgactgaccgatgccgtgcag
tatgtagtggagttcgcaaaacacatcccaggtttccgtatgctcagccagaacgaccag
attgcacttctcaagacaggctccatggaggtggttctggtcaggatgtgtcggttcttc
aacacagagaataacactgtcttcttcgatgggaaatttgctggagttgaggtcttcaag
tctctggcgtgtggtgatttgatcacagcagtgttcgacttcgctcatgacatgtgcgct
ctaaagctcactgagcagcagatcgctctcttcagtgctctggtgctgatcaacgcagac
cgtccatgtctggaggacagaggcagggtccagcgggtgcagagaagcgtggagttagga
ctcacacacattctacaccgagacaacctggaaggtctattgcacaagctgtaccagagg
atggcagtgctgcgttcgctgtgcagtcttcacatggagaagctgcgctggttcagtcag
cgttaccctctcactgctcactctctgttccctccgctctacaaggagctgttcgcctca
gaagccgagctgctgccagggaccacacactga
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