Hippoglossus hippoglossus (Atlantic halibut): 117776760
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Entry
117776760 CDS
T07778
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117776760 (zc3h13)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117776760 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117776760
NCBI-ProteinID:
XP_034466904
LinkDB
All DBs
Position
2:5814576..5823834
Genome browser
AA seq
1807 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSTTTSSTSNPAAPSRRPSVFERLGPSTGSNAADSHCRNWL
KTGNCSYGNTCRYTHGTQPRAKGFSFSRSTERPTGDLRERMKNKRQDADPENLKRDVDEP
ASPTARQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDIGDYDYELSLEMKR
QKIQRELMKLEQENLEKREEIVIKKEETPAKTRTTALPKASPEQLSSKDSPSPRKSGGSP
KHKSGTKGPGSGKKEKKASISSPVSESTRSTKGSHSKKKGPRTPSPPPPVPLDLPVVGKK
HKCKHKNKEKSEEKPKEGKDRGRDTEKHKEKKEKRRDRSDSSHKAKRSVTSEEPSPSRCP
SPTVRKKSTSPKASSHKTSVLVSPPRRSPSLPRHQRTPTPPRHHSPSSHSGSSAQRHSPS
PRRRRSSSPTYHRSSAAAGSSPQSSRRSRSPPASHDASSPRRRSDRSSPGRQHSRGRERS
RGDRERSPPAQERRHEHRDDSRSKREKDSVRDDRDYDSEQVSSRDDRETREARERRDTRD
RGRETVRDHRDSRDVKDSRESRTDTRSSRESLERRDRERERERDREKDRDREKERERERT
DTYRKEEPAQDDRSYGRGHGREDGGRAEGRTENRTDRAERNGRGRGRTNETSDKGSNRNS
RGSQLESTHENWESRSSVARERSVERSTDRSATERSSERGSDRDRYDGDRREQARDSSYD
RRGGHGERDRRDNRERDQRAASPNRHQGRSEEPEREDRRDERRTDRVEERRDDRTRERER
EREREREREKEKDREREREREKEREKEREAAERERAREREREREREREREREREERERER
ERKEREREREQRERERERQREWEERERERGREERRERRDDTREERPVRDTRDDRKTSRKR
PRPESSPSPRASPKRAARDLSPADSDGYNSGEDKSGDKHRLLSQVVRPQEPLLRSPPKPA
PSDDKPSHWKDEERRGAVDKREARSRHEDVEPRVDRNRGGDRRGDDLSKTLPDSRVRGRD
QRESTPPPPPPPPPPPPPVLATSSENTTGSQSHEEGKKKTKSLRKGLKKGRKDEEINTGN
ILAPVGDRFNIEPPTGAPADPPPALHSPRKVPKKKALDRKRKRSRGAESDVSEEDTAAHQ
PHNKKKRGPRTPPPSMRPDNRATVVSAEPSPLPKMDNFSDWSDEEVTAPLAPAEPLRRSA
GPRLGRDRERCNPPPIAPLLPQDPPMLLQTLTPQPLMSQPLLRKPPPEQTRSSSMGSNQS
RTSSRRLRSPSNESAHREDPQGPRSRRGRQPGTNSRDRERERERERPVVNEPPVVAERKS
RIDQLRRGEPSRSTSSDRQDSHSHSSRRSSPDSERQTRSRSRAGSYDSREREREREPFER
ERDRKDLRPPPPQQPQQQQPLLLQQPLQQPRDWEPEPRDWPSRGREPLLIRPSREPPLLR
ERDIRDRERLLPEGLIQQHERERERERERERDSRGERGGDRERMMMMDLPPHGDLRPVGR
GDLRGEMRGDMRGDLRGDMMRPDRSEYEPLLPREAFGPPEPEKASNSHHLMGEPRERELE
KADSIDGDHDGKEEDGQSVPSVGEEYEPISDDELDEILADSQKKEDQQDDEKMTGPLDVI
DVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLRTGISKRLAGPKLLEQVKEVCKSEMDDP
KEADKLFEHDLGALNMAALNRRVERAGLLTNLGPCCKALCARRDFAIRRQLLKNDKGLTK
QYPTTPVVDNELLQMSMRLFRRTVAAQASAPERPDSGSAPAAEVSAAGSGGGSSSKLSTA
QPEVCVS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaagtaacagtggagaattcaaagaccatatctgacagcagc
agcaccacgaccagcagcaccagcaaccccgccgccccctcccgccggcccagtgtgttc
gaaagactcggtcccagcactgggagtaatgctgctgatagtcactgcagaaattggttg
aagactggtaattgcagttacggcaacacttgtcgctacacacatggaactcagccacgg
gccaaaggatttagcttcagcaggtcaaccgagaggcccacaggtgatctgcgggagagg
atgaagaataaaagacaggatgctgacccagaaaacctgaagcgtgacgtagacgagccc
gcatccccgacagcaagacagagagactcctccagaggccgacacagggagaaggaggac
ataaagatcacaaaggaacgcactccagccagtgaagaagagcccacagagtgggaaacc
aatcgagaagactcagatatcggtgactacgactacgagttatccctagaaatgaagcgc
cagaagattcaacgcgagttgatgaaactggagcaggagaacctggaaaagagggaggag
attgtcatcaagaaagaagagacccccgccaaaacgagaaccaccgccttgccgaaggcc
tccccagagcagttgagctccaaagattcaccgtcaccaaggaagtccggtggctccccg
aaacacaaaagtggaaccaaagggccaggctctgggaagaaagagaagaaggcgtccata
tcctcacctgtttcagaatctaccaggtctacaaaagggagccatagtaaaaagaaagga
cctcgtacccccagtcctcctccaccagtccctctggacctccccgtggttgggaagaaa
cacaaatgcaagcacaaaaacaaggagaagtctgaggaaaagccgaaggaagggaaagat
cggggacgagatacagagaaacacaaagagaagaaggagaaacgcagagaccgatcagac
agttcccacaaagccaagcggtcggtgacatcagaagagccttctccctccagatgtcct
tcgcccacagtgcggaagaaatccacctctcctaaagcttcgtcccataaaacctcagtg
ctggtctcccctcctcgcaggtctccctctcttccacgccaccagcggacccctactcct
ccccgccaccactccccttcgtcccactctggctcctctgcccagcgtcactcaccgtct
cctcgccggcgtcgctcctcctctcccacctaccaccggagcagtgctgcagcaggctcc
tcaccacagagctccaggcgctccaggtcacctccggcctcccacgacgcctcgtcgccc
cgacgccgctctgacagatcaagccctggccggcagcactccaggggccgcgagaggagt
cgtggtgaccgagagaggagtccgcccgcccaggagcgcagacatgagcacagagatgac
agccgcagcaagcgagagaaagacagtgtccgtgacgaccgggactatgactcggaacag
gtctcatcacgtgacgacagggagaccagggaggctcgtgagcgacgggacactcgcgat
agaggacgggaaaccgtccgcgaccatcgagacagcagggacgtaaaggactccagagag
agcaggacagacacccggtccagtcgagagtccctggagcggcgggatcgcgagcgggaa
cgagagagggaccgggagaaggacagagatcgagagaaggagcgagagagggagaggact
gatacttacaggaaggaggaacccgctcaggacgacaggagttatgggagaggacatgga
cgtgaagatggagggagagctgaagggaggactgagaacaggacagacagagctgagagg
aacggaagagggagagggcgtacaaatgaaacatctgataaaggctcaaacagaaactcc
agaggttcccaactggaaagtacccacgagaactgggagtcccgaagcagtgtggcgcga
gagaggagtgtggagaggagcacagatcgcagcgctaccgaaagaagctcggagaggggc
tcagaccgagatcgctatgatggtgacagaagagagcaggcccgggactcctcctatgac
aggagaggagggcacggagagcgggatcgcagagacaaccgagagagagatcaaagagca
gcttctccaaacagacaccaggggagatcagaggagcctgagagggaggacaggagagac
gaacgcaggacagatagagtggaggagagacgagacgaccggacccgcgagcgagagaga
gagcgggaaagggaacgggagagggagaaagagaaggacagagagagggagagggagagg
gaaaaggagcgagagaaggagagggaggctgcagagagggagcgggccagggagagggag
cgcgagcgggaacgagagagggagcgggaacgggagcgtgaggagagggagagagagagg
gagcggaaggagcgagaacgggagagggagcagcgggagcgagagcgagagaggcagcgg
gaatgggaggagagggagagagagaggggaagggaggagaggcgggagaggagagatgac
accagggaggagcggcctgttcgagacacccgggacgatcgcaagacgagtcgtaagagg
cccaggcctgagagcagcccgagcccccgtgccagcccaaagcgagcagccagggacctc
agtccggcggacagcgacggctacaacagtggagaagacaaaagtggcgataagcaccgt
ctgctgagccaggtggtgcgaccccaggagcccctgctgcgttctccaccgaagccggct
ccttctgatgacaagcccagtcactggaaggatgaggagcgcagaggagccgtggacaaa
cgggaggcacgcagtcgacatgaagacgttgagcctcgtgtggaccgcaacagaggaggc
gataggcgtggagatgacctttcgaaaactctgccggactcccgtgtcagaggcagagac
cagcgagaatccacgcctcctcctcctcctcctccacctcctcctcctcctccagtcctc
gccaccagcagcgaaaacacaactggaagccagtcccacgaggaaggcaagaagaagacc
aagtcactgaggaaggggctgaagaagggtcgcaaagatgaagagataaacactggcaac
attttagctccagtaggggaccgttttaacattgaacccccaactggtgctcctgcagat
cctcctccagccttgcactcacccaggaaagttcccaagaagaaggcgcttgacagaaag
aggaaacgctcgcgaggagcagagtccgatgtatctgaggaggatactgcagcccatcag
ccacataataagaagaagaggggtccccggaccccaccaccctcaatgaggcctgataac
cgtgctactgtagtcagcgcagagccgtctccactaccaaaaatggacaacttcagtgac
tggtcagatgaggaggtcacagctcccctggctcctgctgagcctcttaggagaagtgct
ggtcctcggctgggcagggacagggagaggtgtaaccccccacccattgccccgctactc
ccccaggatccgccaatgcttctgcagactttgactccacagcctctcatgtcccagcct
ctgctccgcaaacctcctccagagcagacgcgcagcagcagcatgggaagcaaccagagc
cgcacatcatctcgacgcctgagatcaccttctaacgagtccgcacaccgcgaggacccc
cagggtccacgatcccgccggggaaggcagccgggcaccaactcccgcgaccgggaacga
gagagggagagagagaggccggttgtaaatgagcctcctgtggtggctgagaggaaatct
cgaattgaccagttgaggagaggagagcccagccgcagcacctcatcagaccggcaggat
tctcacagccacagctctagacgcagctctcctgactccgagagacagaccagatccagg
tcccgcgccggctcctacgacagtagagagcgggagagagaacgggagccgttcgagcgg
gaacgagaccgaaaggacctccggcctcctcctccccaacagccgcagcagcagcagccc
ctgcttctccaacagcccctccaacaaccacgagactgggagccagaaccaagggactgg
cccagcaggggacgagagcccctgctcatacgtcccagccgtgaacctcctctcctgagg
gagcgtgacatcagggacagggaacgcttgctccctgaaggactcatacagcagcatgag
cgggaaagggagcgggaaagggagcgggagagagacagtagaggcgaaaggggcggcgat
cgagagaggatgatgatgatggacctgccgccccacggggacctcaggcctgtaggccga
ggggacctgaggggagaaatgagaggagacatgagaggagacctgcgaggggacatgatg
cggccggacaggagcgaatatgagcctctgttgccaagagaagcctttggcccacctgag
cccgagaaagccagcaacagtcaccatctcatgggagagccacgggaacgggagctggag
aaggcagacagcattgacggagaccacgacggtaaagaagaggatggccagtcagtgcca
tctgttggcgaggagtatgagccaatcagtgatgacgagctggatgaaattctggctgat
agtcagaaaaaagaggatcagcaggacgatgaaaaaatgacaggtcctctggatgtgatc
gatgtggactggtccagcctgatgcccaaacagaagcaggaaccccgggcagcaggggca
gcgctgctccgattcaccccaggggccgtgcttcttaggacgggcatctccaagcgactc
gccgggcccaagctcctggagcaggtcaaagaggtgtgcaagtctgagatggacgaccct
aaagaggccgacaagctgtttgagcatgaccttggggccttgaacatggcggccctgaac
aggcgggtggagcgggcaggtttgctgaccaaccttgggccctgctgcaaggccctgtgt
gcccgcagagacttcgccatccgtcggcagctgttaaaaaatgacaagggcctaaccaag
cagtaccccactacgcccgtagtagacaacgagctgctgcagatgagcatgcgtctcttc
agaaggaccgtggctgcccaggcttcggccccggaaaggcccgacagtgggtcggcgccg
gcggccgaggtttctgcagccggtagtggtggtggtagtagtagtaagctcagcacagct
cagcctgaggtgtgtgtgtcctga
DBGET
integrated database retrieval system
