Hippoglossus hippoglossus (Atlantic halibut): 117776772
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Entry
117776772 CDS
T07778
Symbol
clstn3
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-3
KO
K22661
calsyntenin 3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117776772 (clstn3)
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Cadherin related
117776772 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
DUF5570
Motif
Other DBs
NCBI-GeneID:
117776772
NCBI-ProteinID:
XP_034466922
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All DBs
Position
16:complement(9088519..9110909)
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AA seq
955 aa
AA seq
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MDRMSILSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSSSFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GXGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKHQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPSLHLETCQETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSNHVAV
VPDSVVSALSGDHFTLQLWMRRGGANIQPSTTQTRGSRKDEETIVCSTVKNDDSFSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPXCDPVLDGVTFDPAL
IHDNGAIPNPAPTRGMFIGACWELEEKQKEILNNTIPEGKDSVKYVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGGPGDSGAGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLSTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEAPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHAGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGAKGAKEGSSQWDDSALTI
IVNPMESYESRMGICTENEGEVEEEEEAAESPDDASDDQRIIIKKEGRDGTARRY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagtattctctcctttctactcctttgcttgacttcggttgccaatggc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggattgtgatggag
aacgacaacaccgtgctgctcaatccccctctctttgccctggacaaagatgctccactt
cactatgctggtgaaatctgtggcttccgggtccacaatggtccctctggttcggggtct
tccagttttgaagcagtggtcctggaccgctccaccggcgagggcctggtccgctccaag
gagccgctggactgcgagagccagcgcgagcacagcttcaccatccaggcctacgactgc
ggcngaggacctgatggagtcaacagcaagaaatcccacaaggccaccgtgcacgtccgt
gttaatgacgtcaatgagttctcccccgtgtttgtcgagcgtcgctacgaggcgtccgtc
ccagaggggcgtctgtttgatcgaatcgtgcgcgtggaggccctggatgccgactgctcc
ccgcagtacagccagatttgcttctatgacatcatcactcccaatgtgcccttcgccatt
gacaacgatggtaacattaagaacactgagccgttggattccaagcatcagcgcgttcac
accttctgggtgaccgccttcgactgcggaaagaaccgcgcccaggccgacgctcaggtc
gtcgtcacggttaaaccgtcctgcaaaccggggtggatcggatggaccaagcgtgtcgaa
tacacacccgggtcaggtagcatccccctgtttcccagtttgcatttggagacgtgccag
gagaccgtgtggaacatccaggccaccgtagagctccagaccggccacatcgggaagggc
tgtgacagagacagctactcggacagatccgtgcgcagactgtgtggtgccgtcaggggt
gaagtcgacctcctcccgcctccatctcctgctgccaactggacctcagctctgcccact
ctcccctcctctgattcgtcactggtcttctccttcaacggatccaaccatgttgccgtg
gtgccggattcggttgtctccgcgttgtcaggcgaccacttcaccctgcagctgtggatg
cgaaggggcggcgccaacatccagccctcgaccactcagaccagaggaagtcgcaaagat
gaggagaccatcgtgtgcagcactgtcaagaatgacgactccttctcccactactccctc
tccgtccacggctgtcgcctctctctcttttactggcccgacgtctcggctgcacggccc
gtcaagttcttgtggaaactggagcaggtgtgcgacagcgagtggcatcacctttcgctc
agcgttcagttccctnnctgtgaccctgtattggacggcgtgaccttcgaccccgctctc
atccatgacaatggtgccatccccaaccccgcccccaccagagggatgttcatcggcgct
tgttgggagcttgaggagaagcagaaggagatactgaacaacaccatcccagaggggaaa
gactcagtgaagtatgtgggcggttaccacggcctgttgtcgggggtgacggtgcgtcct
ggcagcgtggagcctcacagcgtggtggagtgtctgtacgcctgcagggaggggctggac
ttcggaggacctggagactctggggctggcatgaaggttcatgtgaaccccagtcagtcg
gtgttggtgctggaaggagacgacatcgagagctttaaccgcgccgtgcagcaggtcacc
tacagaaactctctccgcttcgccacccctggagtccgacccctcaaactgagcacctca
ctcagatgtttcaacgaggagagctgcctgtcgctcaaacagctggagggatacctggtg
gttctccagcctgacgccccgcagatctctctgtctggcgtcggccctcatctggctcgt
cctgcccctgagttcgaggccccccgcggtgtcccactgttcccagagctccgcatcgtc
tgctccctgtctcacgctgtcaacacggctgcacaggggatggagggtggagctctgatg
tccgacgctgtggctcacaccttggacggctgtgaggtgcaaccactgggggaggagctc
aacccagagagggaggagcttctggtggacatggatgtggtgcgagagaggggactggaa
atcatcaatactacagcttatattgccatcacaggtgccgaatccatctctgtgtacgag
gacgtccttcgctcggtccgctaccgactggccaaaggctcagcccgctttgagaggcgg
ttccgcctgtcctgctccgagatgaatggaagatacaccagcaacgagttgactctggag
gtgaacttcctccactctctggacagtctgtaccacccgtcccacctgctggcctcccag
cagcagtttcttcatccatcccaccatgctggggagttgagtggacacacccttcccaat
ccacaccgcaactcagttgtaccaggagcagctaccgtcatcataatggtgtgcgtgggt
ttcctggttgtcatggtgatcctgggcgttttccgaattcgctccatccatcgccgtggt
gaaggcgccaagggggctaaggagggtagcagccaatgggacgactccgccctcaccatc
atcgtcaacccgatggagtcctacgagtctcgcatgggaatctgcaccgagaacgaaggg
gaggtggaggaggaagaggaggcagcggagtcacctgacgacgccagcgacgaccagcga
atcatcatcaagaaagaggggagagacggcaccgcccgtcgctactga
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