Hippoglossus hippoglossus (Atlantic halibut): 117777021
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Entry
117777021 CDS
T07778
Symbol
scap
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117777021 (scap)
Membrane trafficking [BR:
hhip04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117777021 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
Patched
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
117777021
NCBI-ProteinID:
XP_034467356
LinkDB
All DBs
Position
16:complement(2545249..2572287)
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AA seq
1351 aa
AA seq
DB search
MFPWLPGGQTEQPHTLPETRRNHYVNHRAPLKLTTPGYKRLRAREITWSPINRSLDAPRR
SVLRRPVRSNGRELTPPTRMTLREQLRQKISAAFYRHGLLCASYPVPIILFTSASILTCC
YPLLRLPLPGTGPVEFTTGVRDYSVPSHEPQGDLGERPDWYRGPPVAYIQQVLVKAAVSP
WDSSLVPVDMFRSPLGRVFTLLEEIRNHVHTDSSGVRSLEALCLQVTDLFPGLRRMQSVL
PEHGCLLVSPGNYWQNQRELFDSDPDLLKTIQKHEPKGLHTSATLRDLLFGVPGKYTGVS
HYNRKRVVTYTITVVLSSYDARFLGSLRARLKQLHPSANCSLRDDHMVHVHFKEEIGIAE
LIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLN
GGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELCIIL
IGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPAEAGLPP
PKPGPLRPREVPPPPRPSPHTITLQTPSLRTLRLPKRLRVVYFLARTRLAQRIIMVGTVI
WIGILVYTDPAGIRTYLAAQVSEQSPLGDPGGAGLPPQLGVAPVFRGGDTTSTLSIHPAP
DPTPVPENQSQGHYGSARAGSEGGAPPAVPQITWGSEDEEGWRRLSFRHWPSLFSYYNIT
LAKRYISILPVIPVTVHLSPQEAIETRHPQDTRHPPPPIPKVSADLQTDLTLYKVAFLGL
AAGVLLVLLLFCLYRVLCPRNYGQNGVTHGRRRRGDLPCDDYGYSPPVSEISPLLLRGHS
MDIECLASDGMLLASCCLAGQIRVWDAQTGDCLTVIPNHGLTRSNSSGCWEQRDGWDSMS
GAAELEGLGSDGYDRCNPGDSLSEDEAYPLRRRSAPARPTLFNDQPDLTPLIDTNFTCLP
PSHLSMPPRAGFDFGGLVERAYMEHEPPSPSGHPSPSSTSSSPPSAAQLQRRPSLGDAAG
VFTQERVSTAGTQATADWESSVWALELRGNLIAAGRSSGKLELWDAVEGSLRCNNEDGVS
GITALAFLNNRIVAARLNGSLDFFTVDMNKPLGLLQYRGGPGRGSMPPSPCYSSEDAISV
QLTRSIQCAHHKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCCLFTLQGHSGGITAIYID
QTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTTCVISSGLDDLICIWDRS
TGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLSFGDLLQTVYLGQSSDGQGVR
QLLVLDNAAIVCDFGSELSLVYVPSVLEKLD
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtggctcccggggggacaaaccgagcagccacacactctgcctgaaacccga
aggaatcactatgttaaccacagggctccgcttaagctcacaacacctggatataaacgg
ctgcgagccagagagataacctggtcccccatcaacaggtccctggatgccccgcggcgc
tctgtcctccgccgcccggtgcgttccaatggccgggagttgaccccgcccaccaggatg
acgctgcgcgagcagctgaggcagaagatctcggcggccttctaccgccacgggctgctg
tgtgcctcctacccagtacccatcatcctcttcacctcggccagcatcctcacctgctgc
tatccgttattgaggcttcccctgcctgggacgggtcctgtggagttcaccacaggggtg
cgagactacagcgtcccttcccatgagcctcagggagacctcggggaacgacccgactgg
taccggggtccgccggtcgcctacatccagcaggtgctggtgaaggcagcggtgtctccg
tgggacagcagcctggtgccggtggacatgtttcggtcgcccctgggtcgagtctttacc
ctgctggaggagatccgtaaccacgtccacactgacagctctggggttcgcagtctggag
gcgttgtgtctccaggtgaccgacctgtttccagggttacgacggatgcagtcggtgctt
ccagaacacggctgcctgctcgtctcccccggcaactactggcagaaccagcgggagctg
ttcgactcggaccccgacctcctcaagaccatccagaaacacgaacccaaaggcctgcac
acctcggccacgctgcgagatctgctgttcggcgtccctggaaagtacacgggggtcagt
cattacaacaggaagagggtggtgacgtacacgatcaccgtggtgctgtccagctacgat
gcaaggttcctgggcagcctgcgggcgcgtctgaagcaactccacccgtcggccaactgc
agcctgagagacgaccacatggttcacgtgcacttcaaggaggagatcgggatcgcggag
ctcatccccctcgtcaccacatacatcatcctttttgcctacatctacttctccacacgt
aagattgacatggtgaagtcgaagtggggcctggctctggctgctgtggtcaccgtgctc
agctccctgctaatgtcagtgggactgtgcacgctgtttggactgacaccgacgcttaat
ggaggggagatctttccgtacctggtggtggtcatcggcctggagaacgtcttggtcctc
acaaagtctgtcgtgtccacaccggtcgaccttgaggtcaaactccgcatcgctcagggc
cttagtaatgagagctggtctatcatgaagaacatggccactgaactgtgcatcatcctc
attggatatttcactctagttccagctatccaggagttctgtttgtttgctgttgtgggg
ctggtgtcggacttcttcctgcagatgttcttcttcaccacagtgctgtctatagacatc
cggcgcatggagctggccgacttgaaccgccgcctgccggcagaagccgggctccctcct
cccaaaccaggcccactgcgtccacgtgaggtcccacccccaccacgaccctccccccac
acgatcaccctgcagaccccgtccttgaggaccctgaggctccctaagaggctgcgtgtg
gtgtatttcctggctcgcacacgcctggctcagcgtatcatcatggttggcacggtgatc
tggatcggcatcctcgtctacaccgacccagccgggatccgcacctacctggctgcacag
gtgtctgagcaaagccccctgggagatcccggaggagccggcctgcctccgcaactgggg
gtggcccccgtcttccgtggtggagataccaccagcaccctcagcatccaccccgcacca
gatccaactcccgtacccgagaaccaatcgcagggccactacggctcggccagggcgggg
tccgagggaggggccccgcccgcggtgcctcagatcacgtgggggtcggaggacgaggag
ggctggaggaggctgtccttcaggcactggccgtcgctcttcagctactacaacatcact
ttagccaagaggtacatcagcatcctgcccgtcattcccgtcaccgtgcacctgagtccc
caggaggccattgagacacgacaccctcaggacacgagacatccccccccacccatcccc
aaagtctctgcagatctacagactgacctcaccctctacaaggtggcgtttctgggcctg
gcggcgggcgtcctgctggttctgctgctcttctgtctctaccgtgttctctgcccacgt
aactacggtcaaaacggcgtcacccacggacgccggcgccgaggggacctgccctgtgac
gattacggctactcgccccccgtcagcgagatctcaccacttctgctgaggggccacagc
atggatatcgagtgtttggccagtgacgggatgctgctggcgagctgctgcctggccgga
cagatccgtgtttgggacgcccagaccggagactgtctgaccgtcatcccaaaccacggg
ttgacacggagcaacagcagtggctgctgggagcagcgggacggctgggacagcatgagt
ggagcggccgagctggagggtttaggctctgacggctacgaccgctgcaaccctggcgac
agcctctcggaggacgaggcgtacccactgagacgccgctctgcccccgcccggccgaca
ctgttcaacgaccagcccgacctcaccccgctcatcgacaccaacttcacctgcctgccg
ccctcccacctctccatgccccccagggcagggtttgactttggcggtctggtggagcgc
gcctacatggagcacgagcccccttcgccctctggtcacccctctccttcctcaacctcc
tcctcgccgccctcagctgctcaactccagagaagacccagcctcggggatgcagccggc
gtctttacccaggaaagagtctccacagcaggaacgcaggcgacggccgactgggaaagt
tccgtctgggccctggagctgagagggaatctgatcgctgctgggaggagcagcggtaaa
ctggagctgtgggatgctgtggagggttcgttacgctgcaataatgaagacggtgtatcg
gggatcacagctctcgccttcctcaacaacagaattgtggcggctcgactcaacgggtct
ctggatttcttcacggttgacatgaacaaacctctgggtctgctgcagtacagaggtgga
cctggacgaggcagcatgcctccgtctccctgttacagcagcgaggacgccatcagcgtc
cagctcacacgctcgatacagtgcgctcaccacaagcccatcacggtgctgcgagcggcc
gccgggagggtcgtcaccggcagccaggaccacacagtccgggtttatcgtctggaggac
tcgtgctgcctcttcacgctgcagggtcactcaggagggatcaccgccatctacatagac
cagacgatggttttggcgagcggtgggcaggatggcgccatctgcctgtgggacgtcctg
acaggcagccgggtcagccatgtttacggtcaccgtggcgatgtcacctctctggtctgc
accaccacctgtgtcatcagctcaggactggatgacctcatctgcatctgggaccgaagc
accgggatcaaactctactcgatacagcaggaagtgggatgcggcgccagtctgggcgtg
atctccgagtccctcctggtcacggggggccagggctgcgtctccttctgggacctgagc
ttcggggacctgctgcagacggtgtacctgggccagagcagcgatggccagggcgtccgg
cagctgctggtgctcgacaacgccgccatcgtctgcgactttggcagcgagctcagcctg
gtgtacgtgccctcggtgctggagaagcttgactga
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